| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0559 |
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| Symbol | |
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| ID | 8224128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 627794 |
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| End bp | 631777 |
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| Gene Length | 3984 bp |
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| Protein Length | 1327 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928435 |
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| Product | histidine kinase |
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| Protein accession | YP_003084989 |
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| Protein GI | 255034368 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00477073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTA AATTGGTGAG AATATTCATT TCCATCCTGC TGTCGCTATG GATTGCAATG
CAAGCCGTTG CGCAGGATAT CCCATTCTAT TTCAGGAATT ACCAGGTTTC GAACGGCTTG
TCGGGTAATG CCGTCGGCGA AATGGTACAG GACAAGAAGG GCTTCATGTG GTTTGCGAGC
CGCAACGGCC TCAACCGCTT CGACGGCCAC ACTTTCCGGA TTTTCCAGAA CATTACAGGC
GATTCGCTCA GTATCGGCAG CAATTCGATA TTTGCATTAT ACGAAGATAC CTCCGAGAAG
CTCTGGGTGG GCACGCACAA GGGCGTGTAC CGGTACGACC CCGTCGCCGA CCGCTTCGAT
GCATTCAAAC TGATCCCGGC CGGCGAGGTG CTTGAAATCC GTGGCGACCG CAATGGCAAT
ATCTGGATCA TTTCCAATCT CCAACTATAC CGCTACCACC TCCGCACAGG CCGCGCCGCC
CGGGTCGACC TGGGCAACGA CCAGCCCGTT TCGCTGCACG TATCGCCGGC AGGAGCCGTT
TGGGTGGCGT GCAATAATGG CGTGGTGAGG CATTATCAGC AGGATACGGG CCGTTTCGAG
GCTTTCAATG TGGGCCAGCT GTCGGGCGTC CGGGATATTT ACGGCGCCAT GACGCTCCAT
GCGGTGGGCG ATTCATCGCT GCTGATCGGC TCGATGAAGA AGGTGCTGCT GCTGAATGTA
GCCAAAAAGC AGGTCCGCAA CCTCACCGCA GCCGGAATGC CGGGGGAAGA CGTTCAGGTG
CACACAATTT TCCAGAAAAG CGACCGCGAA TTCTGGCTGG GCACGGAATC GGGATTGTAC
ATTCTCGACC TCGTCTCGGG AAAGTCGCAG CACATTGTGC GGGAGCGCTT TAACCGCTAT
TCGATCACCG ACAACATCAT CAATTCCATC CTGCGCGACC GCGAAGGCGG CATCTGGATT
ACGACGCAGT TCGGCGGGAT CAACTATTAT TCGACCCAGT TCAACAATTT CCGGAAGTTT
TTCCCAAAAC CCGGCAACAG CATCAGCGGC AGCATTGTAC ACGAAATCAC AAAGGATCGG
AACGGGCATT TGTGGGTCGG CACGGAAGAC GCCGGGCTGA ACCGGCTGGA CATTCAAACG
GGCCAGTTCA AGGCTTTCCT GCCCGACGGG CGCCACGGCA GCATTTCCTA CCGCAACCTC
CACGGCATGG TGGTGGACGG CAACGAGCTG TGGGTGGGAA CTTACGAACA CGGCCTGGAC
GTGATCGATC TGCGCACCGA GCGGGTGGTA CGGCATTACA ATGCATCCTC AGACCCGCGC
TCGCTGAGCA GCAATTTTAT TGTGACGATG TACAAAACGC GCGAAGGGGA CATTCTCGCA
GGTACATGGA TAGGCCTTTG TAAATACAAT CGAGAAACCG ACGATTTTAC CCGCATTCCA
TTCTTTAACA GCCAGGTACA GAGCATTCAT GAAGACGCCG AGGGCACATT GTGGGTAGCC
AGCTATGGTC GCGGGGTGTC GTATTATAAT CCCAAAACCC GGAGACAAGG ACATTTGCGG
TACAGCGCAG ACCGGCCGGG AGGCTTGGTG GATAATTACG TCAACAGCAT CTACCAAAGC
TCCGACAAGA GCATCTGGCT CTGTACCGAG CACGGCCTCT CTCGCTACAA TCCCCAAACC
GGCAAATTCC GCAACTACCG GAAAACCAAC GGCTTGCCCG ACAACCAGGT GTTCAGGGTC
CTGGAAGACG ACGCCGGGAA TTTCTGGATT ACCACCTCGC GCGGCCTCGC GAAGCTCGAC
GGCCGCACAG ACCACTTCAC AAACTTCCAC ACCGGCAACG GCCTTCCGAC GGACCAGTTC
AACTACAATT CGTCGTTCAA GGACCCCGAC GGAACGCTGT ACTTCGGTAC CGTGGCCGGG
ATGGTGGGAT TCAAGCCGGC CGCATTGCTG CGGAATGCAT TCGTGCCGCC GGTGTACATT
ACCCGTTTGC AGGTCAACAA CCGCGACGTA GATATCCGGG CGGAAGACGC GCCGCTGAAA
CGATCCGTGA TTTACGCCGA CGAGCTCACG CTGCCTTACC AGAGTTCGAG CCTGAGCTTC
GACGTGGCGG TGCTGAGCTA TGTGATCCCG GAGCAAAACA CCTACCAATA TCAGCTCGAA
GGCCTATCGA AGGAGTGGGT GCCGATTCAG GACAATAACC GGCGTATCCA GTTTTCGAAA
CTTCCGCCGG GCGACTACAC GCTCAAAATT CGCGGTGCCA ACAACGACGG CCTGTGGAAT
AACCGCGAAA CGCGCCTGCG CATCACGATT CTACCGCCGT TTTGGGCCAC GGGCTGGGCA
TATCTGGTTT ATGTGGTGCT GGTGGTGAGT ATTATTGTTG TAATTTTCCG TTATTATTTT
CTCGCCCTCC ACGAAAAAAG CCGCCGGCAG ATCGAGACGA TTGAAATGGG GAAAGAGCGG
GAGATTTATA ACGCCAAGAT CGACTTTTTC ACGAATGTAG CCCACGAGAT CCGCACGCCG
CTGACGCTGA TCAAAATGCC GCTTGACAAG CTGCTGGCCA GCCGGAAATC GGACCCCGAA
ACGATTGAGA GTTTGAATAT GATCGATAAA AACACCTCCC GACTGATAGA TTTGACCAAC
CAGCTCCTCG ATTTCCGAAA GGCCGAGGCG AACAATTACA GCCTCAATTT TACCAAAACC
GACATTAATG ACCTGCTGAA CGACGTTTTC GCCACGTTCC GCCCGGCAGC CGAGCAAAAG
CAGCTGCAAT ACAAACTCGA ACTGCCGCGC ATTACCTTGC AGGCATTTGT AGACGAAGAA
GCGTGTAAGA AAATCACGAG CAACCTCGTG AGCAACGCGA TCAAATATGC CGAAAGCAGC
GTAAAAGTGA AGCTATCGCC CTTTAACAGC GACGACCTGC TCTTCCACAT CGAGTTCACT
AACGACGGCC CGCTGATCGG CTACGACGAC CGCGACCGTA TTTTCGAGCC TTTCTACCGC
GCCGAAGGCC ACAGCAAGGA ACAGGGAACG GGCATTGGCC TGCCCCTCGC CCGCTCGCTC
GCGGAGCTGC ACAAGGGCAC GCTCGAACTG AAACGCTCGG ACCTCGACCA GAATACGTTC
CTGCTATCGA TCCCCATTCA CCAGGACTAT GAGCTGGATC TGAAAAAGGA GGATGAAAAT
TCGCAAAGCG CCGAACCGGA TGAATCGGAA CAGACTTCGG CCAACCCCAA TAAGCCGAAT
GTGCTGCTGG TGGAAGATAA TGCCGAAATC CTGGGCTACC TGGGCCGCGA GCTGAGCCTG
GATTACAACA TTTTCAGGGC CGGCGACGGG CGGCAGGCGA TAGATCTGTT GCAGGAAGAG
AACATTCACC TGGTGATCAG CGATATTATG ATGCCGGTGA TGGACGGCAT TGCATTGTGC
CGCGAAATGA AGAATGACGT GCGTTTCAGC CACATTCCCA TCATTTTGCT CACCGCGAAA
AACTCAATCA GCTCAAAGAT CGAAGGGCTC GAAGTGGGCG CGGACGCTTA CATTGAAAAG
CCGTTTTCAC TGGACCACCT CTCGGCGCAG ATCAGTAACC TGCTCCACAA CCGCGACATT
ATCAAGGACT ACTTCGCCCG CTCGCCGCTC ACGCATATCA AAGGCATCGC ATTCTCGCGC
GCCGACAAAG ATTTCCTTGA ACAGCTGAAC GCCATCATCA CCGTCCACAT CGCCGACAGC
GACCTGGACG TGGATATGCT TTCGTCCAAA ATGAACATGA GCCGGCCGAC GCTTTACCGG
AAGATCAAAG GCATTTCCGA CATGACTCCC AATGAATTGA TCAACCTTTC ACGGCTTAAA
AAAGCGGCGG AATTGCTTGC GGAAAAGAAC TACAAAATCA ACGAAGTGGC GGATATGGTG
GGTTACAGCG TGCCGACCAA CTTCTCCCGC GATTTTCAAA AACAATTCGG TGTAAGCCCA
TCCGGTTATG TAAATACGTT GTAA
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| Protein sequence | MQIKLVRIFI SILLSLWIAM QAVAQDIPFY FRNYQVSNGL SGNAVGEMVQ DKKGFMWFAS
RNGLNRFDGH TFRIFQNITG DSLSIGSNSI FALYEDTSEK LWVGTHKGVY RYDPVADRFD
AFKLIPAGEV LEIRGDRNGN IWIISNLQLY RYHLRTGRAA RVDLGNDQPV SLHVSPAGAV
WVACNNGVVR HYQQDTGRFE AFNVGQLSGV RDIYGAMTLH AVGDSSLLIG SMKKVLLLNV
AKKQVRNLTA AGMPGEDVQV HTIFQKSDRE FWLGTESGLY ILDLVSGKSQ HIVRERFNRY
SITDNIINSI LRDREGGIWI TTQFGGINYY STQFNNFRKF FPKPGNSISG SIVHEITKDR
NGHLWVGTED AGLNRLDIQT GQFKAFLPDG RHGSISYRNL HGMVVDGNEL WVGTYEHGLD
VIDLRTERVV RHYNASSDPR SLSSNFIVTM YKTREGDILA GTWIGLCKYN RETDDFTRIP
FFNSQVQSIH EDAEGTLWVA SYGRGVSYYN PKTRRQGHLR YSADRPGGLV DNYVNSIYQS
SDKSIWLCTE HGLSRYNPQT GKFRNYRKTN GLPDNQVFRV LEDDAGNFWI TTSRGLAKLD
GRTDHFTNFH TGNGLPTDQF NYNSSFKDPD GTLYFGTVAG MVGFKPAALL RNAFVPPVYI
TRLQVNNRDV DIRAEDAPLK RSVIYADELT LPYQSSSLSF DVAVLSYVIP EQNTYQYQLE
GLSKEWVPIQ DNNRRIQFSK LPPGDYTLKI RGANNDGLWN NRETRLRITI LPPFWATGWA
YLVYVVLVVS IIVVIFRYYF LALHEKSRRQ IETIEMGKER EIYNAKIDFF TNVAHEIRTP
LTLIKMPLDK LLASRKSDPE TIESLNMIDK NTSRLIDLTN QLLDFRKAEA NNYSLNFTKT
DINDLLNDVF ATFRPAAEQK QLQYKLELPR ITLQAFVDEE ACKKITSNLV SNAIKYAESS
VKVKLSPFNS DDLLFHIEFT NDGPLIGYDD RDRIFEPFYR AEGHSKEQGT GIGLPLARSL
AELHKGTLEL KRSDLDQNTF LLSIPIHQDY ELDLKKEDEN SQSAEPDESE QTSANPNKPN
VLLVEDNAEI LGYLGRELSL DYNIFRAGDG RQAIDLLQEE NIHLVISDIM MPVMDGIALC
REMKNDVRFS HIPIILLTAK NSISSKIEGL EVGADAYIEK PFSLDHLSAQ ISNLLHNRDI
IKDYFARSPL THIKGIAFSR ADKDFLEQLN AIITVHIADS DLDVDMLSSK MNMSRPTLYR
KIKGISDMTP NELINLSRLK KAAELLAEKN YKINEVADMV GYSVPTNFSR DFQKQFGVSP
SGYVNTL
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