Gene Dfer_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0549 
Symbol 
ID8224117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp616092 
End bp616961 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID644928424 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003084979 
Protein GI255034358 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.587181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC AAGCTTATAA CTACGACAAA ATCGCCAAAG CCATCGAATA CATCGTGGCG 
AATGCGAAAG AACAGCCCAC GCTCACCGAG GTGGCCGACG AAGTCAGCAT CAGCCAATTC
CATTTCCAGC GCCTGTTTTC CGAATGGGCC GGTGTAAGTC CCAAGAAGTT TCTGCAATAC
ATCACGGCCG GTTATCTTAA AGACCGCATT CGCGAGTCGA CCAGCCTTGC CGAACTGGCG
GAATCGGCCG GGTTATCAAG CCAGAGCCGG GTGTACGACC ATTTCATTTC CATCGAGGGC
GTGACGCCGC AGGAATATAA GACCGCCGGT AAGGGGCTGG TAATCAGTTA TGGTTTTCAT
GAAACTCCGT TTGGTGATTG CTTCATCGCC GCCACTGAAC GGGGCATTTG CGCAATGGCC
TTTGTGGACG AAGCCACCCG CGATATGCAG TTGATCGAAC TGGCAAGAAA GTGGCATTAT
GCGACCATTC GCCCTGATCA ACAGCTCACG GCCGGCTATA TCGGGCGCAT TTTTAAGCCA
GCCGGCCAGT CGCTCGAAAA GCTGCCGTTG CTTGTGCAGG GCACCAATTT TCAGCTCAAA
GTGTGGGAAG CATTGCTAAG CATTCCACAA GGCGCCGTGA CCACCTATCA GCAGATCGCC
GAGCGGATCG GGCATCCGAA AGCAGTACGG GCCGTGGGCT CGGCCGTGGG CGATAATCCG
GTCGCTTACA TTATTCCATG TCACCGGGTG ATCCGTAAAG AAGGCGTTTT GGGCGAATAC
CGCTGGGGCA GCCTGCGCAA AAAAGCATTG ATCGGTTGGG AGGCAGCCCG TCAGGATGAG
GAATATTTTG CACAGAAACA ACCGCTTTGA
 
Protein sequence
MNQQAYNYDK IAKAIEYIVA NAKEQPTLTE VADEVSISQF HFQRLFSEWA GVSPKKFLQY 
ITAGYLKDRI RESTSLAELA ESAGLSSQSR VYDHFISIEG VTPQEYKTAG KGLVISYGFH
ETPFGDCFIA ATERGICAMA FVDEATRDMQ LIELARKWHY ATIRPDQQLT AGYIGRIFKP
AGQSLEKLPL LVQGTNFQLK VWEALLSIPQ GAVTTYQQIA ERIGHPKAVR AVGSAVGDNP
VAYIIPCHRV IRKEGVLGEY RWGSLRKKAL IGWEAARQDE EYFAQKQPL