Gene Dfer_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0516 
Symbol 
ID8224083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp578219 
End bp579115 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content55% 
IMG OID644928392 
Productpeptidase T2 asparaginase 2 
Protein accessionYP_003084948 
Protein GI255034327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.180348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA TAGCCATCCA CGGTGGGGCG GGTTCGCTCG ATGCAGCCGC GCTTTCCCCG 
GCGCAAGAAA AACTTTATCA TCTGGGTCTG CATACTGCAT TGAATGCAGG GTACACGATA
CTGCAATCGG GCGGAGCAGC TATCGACGCG GTGCAGCACG CGGTGATGCA GCTGGAAGAC
AACCCGCTTT TCAATGCAGG CAGGGGGGCT GTCTTTAATT CCGATGGAGT GCAGGAGCTT
GATGCGGCAA TGATGTGCGG CAAAACCTTG CGGGTAGGTG CGGTAGCTGC GGTAACAAAT
GTCAAAAACC CAATCCTGCT TGCCAGAAAG GTGATGGAAG ACCCGCAATT TGTGCTGCTG
GTCGCCGAGG GGGCGCATAA CTACGCCCGA AAAAGTGGTA TTCCGATGGA AGAGATGTCC
TACTTTGCTA CCCCCGAGCG GTACCAGCAG TTGCAGGATG CGAAAGATGC GCATTTGCAA
AAAGCGTCCG ATACAGTGGG TGCTGTTGCG CGCGATATGC ATGGGAACCT GGCAGCCGCC
AGCTCCACAG GTGGTCTTAC TAATAAGAAA TATAGTCGGG TGGGTGACAG CCCGGTGATT
GGTGCGGGCA CCTACGCCCA TAACGATACC TGCGCCGTAT GCTGCACAGG CGATGGCGAG
TACTTTATAC GACTGGTAAC CGCGCACGAC GTGGCAGCAA TGCTGCAATA CCAAGGTTTA
ACCCTGGCGG AGGCATGCGA TGCAGCGATC CATGAAAAGC TGAATGCCTT GAAAGGGGAA
GGTGGGCTGA TCGCCATAGA CTTTGCAGGC AATATCGAAA TGAGTTCGAA TTGCGCAAGT
ATGCCCCGGG GATGGGTGAA AAACGAAGGA AACCTGAATA CGGCGATATG GATGTAA
 
Protein sequence
MFSIAIHGGA GSLDAAALSP AQEKLYHLGL HTALNAGYTI LQSGGAAIDA VQHAVMQLED 
NPLFNAGRGA VFNSDGVQEL DAAMMCGKTL RVGAVAAVTN VKNPILLARK VMEDPQFVLL
VAEGAHNYAR KSGIPMEEMS YFATPERYQQ LQDAKDAHLQ KASDTVGAVA RDMHGNLAAA
SSTGGLTNKK YSRVGDSPVI GAGTYAHNDT CAVCCTGDGE YFIRLVTAHD VAAMLQYQGL
TLAEACDAAI HEKLNALKGE GGLIAIDFAG NIEMSSNCAS MPRGWVKNEG NLNTAIWM