Gene Dfer_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0505 
Symbol 
ID8224072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp568131 
End bp568796 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID644928382 
Producthypothetical protein 
Protein accessionYP_003084938 
Protein GI255034317 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.459483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATC TGAATTCAAA AATGGGTCAA ACGTTAAAAG CAGAAGGCAT TCTCAATCAA 
ATCCACCCTG ATACGAAACT GGGCGACCTT CGAAAAATCG CCAAGGATAT CGGGAAAGAT
CACGAGCTGG CCATGGAACT TTGGTCAAGC GGGAACTTCT TGCCCCGACA ATTGGCGATT
TTGATCATGG ACAGCAAGCG CGTCTCGCAA AGTCTGGTCG ACGAACTGGA GAAGGATATG
CAAACTCATC CCATCGACGA GCGGAATCAG CTGATCGATT GGTTAATGGC TAATCAGTTG
ATGAAAGATA AGAAGACCAT CGCTCTGGTT GAATCATGGG AAAACGCCGC ATCGGCTTTA
CAAAGGCGCG TTTTTTGGTA CCATCAGGGG CGCTTGCGTT GGATGGGTAA AATACCGCTG
GATAACGCGG GGGAACTGCT TACCAAAATA GAAGCCGGTA TTGTAAATGA GAAGCCAGAA
GTACAATGGG CCATGAACTT TACCGCCGGC TGGATCGGCA TTTACGAAAA GCAGCATCGC
GACCGCTGCA TCGCGCTGGG CGAAAAAACC GGCCTTTATA AAGGCGATAA AGTTTCGAAA
GGTTGCACAC CCGATTACCT GCCGGAGTTT ATTGCGATTG AGAGTAGGAA ACAGAATATG
GGTTGA
 
Protein sequence
MSNLNSKMGQ TLKAEGILNQ IHPDTKLGDL RKIAKDIGKD HELAMELWSS GNFLPRQLAI 
LIMDSKRVSQ SLVDELEKDM QTHPIDERNQ LIDWLMANQL MKDKKTIALV ESWENAASAL
QRRVFWYHQG RLRWMGKIPL DNAGELLTKI EAGIVNEKPE VQWAMNFTAG WIGIYEKQHR
DRCIALGEKT GLYKGDKVSK GCTPDYLPEF IAIESRKQNM G