| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0502 |
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| Symbol | |
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| ID | 8224069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 562287 |
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| End bp | 567014 |
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| Gene Length | 4728 bp |
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| Protein Length | 1575 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644928380 |
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| Product | lipoprotein |
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| Protein accession | YP_003084936 |
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| Protein GI | 255034315 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.620204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TTTACACGAT TTTGCTGGTG TTGCTAGGCC AGCTTGCCCT CGCCCAAAAC
GAATTTATTA CCCGATGGGA CCTCTCCGTT TCCGGCTCGG GTGCTACGCA ACTTAGTTTT
AATGTAGCCA CGTCGGGTCC GGTGAACTAT ACCTGGACAG AAGTATCGCC GGGTACTGCC
ACGGGTTCGG GCGCATTTGA AGGCGCAACT GCTACCATCA CGGATTTACC TGCCGGAGCG
ACCATCGAAC TCAGCATCGC CCCGACTCAC TTTAAAAGGA TACATATTAA TAATGGTCAG
GACCGAAAGA GGTTGCTGGA TGTGGTGCAA TGGGGAACCG TCTCCTGGGC ATCGATGAAT
CAGGCCTTTT ATGGTTGCGC TAACCTGCAA ATAAGTGCAA CGGATCTGCC GGATTTGAGC
GGTGTGACAG ATATGTACCG GATGTTCAGG GGATGCTCCT TGTTGAATGG TCCGGCCAAT
ATCGGTGAAT GGAATACGCA AAACGTGACC AATATGGGTG CGGTTTTTTG TGAAGCCACT
GCTTTTAATC AGCCTATTGG CACATGGAAT ACGGCCAATG CCACTAATCT AGCCGGGATG
TTCATTCTTG CCCGGGCTTT TAATCAGCCT ATCGGCTCCT GGAACACATC AAAGGTGACC
GACCTTACCG AGCTGTTTTT CGGCGCCTCG GCTTTTAACC AGCCGGTTGG AAATTGGAAT
GTAGGTACGG TGTTCAGAAT GACGTACATG TTTAAAGATG CCACGTCGTT TAATCAGACT
TTGGGCACCT GGAAATTGAA CCGGAGCGCA TTTTTAGTGT CGATGCTCGA TAACAGCGGC
ATGGACTGTT ACCACTACGG TGAAACACTG ATTGGTTGGG CTCAAAACCC TGCAAGTCCC
CAGGGAACCT TGCTGAGTGG CATCGGGCGA ACATACGGCA GCGCGGATGC CATTGCCGCC
CGGAAGTTCC TGATTGAAGA GAAGAAATGG GTGATCGGAG GTGATGCGGC ATCGGGCAGT
GAATGCGCCC GCCCGTTCGT AACCCGGTGG GATTTAGCCA GGTCAGGCTC CGGCGGCACG
CAGCTTAGCT TTGGAGTGAG TACCAGCGGA CCGGTCAATT TCACCTGGAC AGCAATCGGT
GCCGGCACTC CCGCGAGCGG CCTGGGGACT TTTAATGACG GCACGGCCAC GATTACCGGT
CTTCCGGCAG GGGCCACCAT CGAGCTCAGG ATCGATCCTG CCAATTTTCG AAGGATCAAT
ATCGGCAATG GACCCGATAA ACAGCGCCTG AACGACATCG TGCGGTGGGG CTCTGCGGGC
TGGACGAGCA TGGAAAATGC TTTTTATGGC TGTACAAACC TCCAAATCTC TGCCCCCGAC
ATGCCTGATT TGAGTACGGT TACCAGCTCG GCAGCCATGT TCCGGGGATG CAGTGCGCTC
ATGGGACCTG CCGACATCGG TGATTGGAAT ACGGCCAACG TCACCGATAT GACCGGGATG
TTTCAGGACG CCATTGCTTT TAACCAGTCT TTGGGCAGTT GGGAACTGGA TGCGTCGGTG
AATCTGAGTA ATTTTTTAAA TAACAGCGGC CTGAGTTGTT TGAACTATGG CGAAACATTG
AAGGGCTGGG AGGCAAACGC GGCTACTCCT CCCGGAAGGA ACCTTGGCGC AGTCGGCCGT
ACTTATGGTA CTGAGGCGGA AAACGCACGG GAGGCGCTTG TAACCGTCAA AGGCTGGACG
ATCAATGGCG ACGGAGCATC GGGCAGCGAA TGTTCAGGAA ATTTCATCAC GCAATGGGAC
CTGTCGAAAA CTGGTTCGGG CGACGCTCAG ATCAGCTTCG GGGTGATTAC CAGCGGACCG
GTTGGGTACA CCTGGACAGA AATCTCTTCC GGCACTCCCG CCACCGGTTC CGGCACTTTT
GATAACGGCA CGGCCATTAT CACCGGTTTA CCTGCTGGCG CGATGATCAA GGTCAGCATT
AACCCGGCTA ATTTCCAGGG TATCGCTATT GCCAATGGCC AGGATAAAGA TCGTTTGGTA
GTTGTAAGCA GTTGGGGAAG CACCGCGTGG GCCTCTATGA ATGCTGCTTT CGATGGCTGT
ACCAACCTTC AGATCACGGC CATCGATCTG CCTAATCTGA GTTTGGTTAC CAGCATGGCC
TCGATGTTTC GCGGATGTGC CGCGCTAAAC AGCGTGGGCA ATATCGGCAG CTGGAATGTG
GCAAATGTGA CGGATATGTC CAGCCTGTTT GAAGGAGCCA GCGCTTTTAA TCAAAACATT
GCCGGCTGGA ACACGGGGAA TGTGAGGCGT ATGGATAGGA TGTTTGAGCG GGCAGGTGCT
TTCGACCAAC CCATCGGCAC ATGGCATACC GGACAGGTCA CGGATATGCA TTCCATGTTT
GAAAATGCCG CAAGCTTCAA ACAATCTGTG GGCGCCTGGA ATACCGGGAA TGTGACAGAC
ATGACTGCCA TGTTTAAAGG CGCCACCGCT TTTAATCAAC CGTTGGGTAA TTGGAAACTG
AATGCCGCGG TGATCCTGGC AAATTTCCTT GATGACAGTG GTTTGAATTG CATCAACTAC
GGCGAAACGC TGAAAGGCTG GGCTGCCAAT GCTGCTACGC CCAATGGACG CAACCTTGGC
GCATTGAACA AAACCTACGG CACAGAATCC GAAGATGCCC GGGCTTATCT GATCGCAACC
AAAGGCTGGA CCATCACCGA CGATGTCGCA TCCGGTACCA ATTGTTCGGG CGCCTTCGTC
ACAAGATGGG ACCTGAGCAC CGGCGGCTCG GGCACTACTC AACTCAGCTT TGAGATTGGC
GTTGCCGGGA CGGTGAGTTA TACCTGGAAA CAGATTTCTT CGGGCTCTTC CGCCAGCGGT
TCCGGTACTT TCACCACCTA CAACGCAACC ATCACGGGCT TACCCGCAGG AGCCACAATC
GAACTTAGCA TCCTTCCCAC CAATTTTCGC AGGATAAATA TCAATAATGG TCAGGACAAA
AACCGGCTGG TAGATATCGT GAACTGGGGA ACAACAGCGT GGAATGCAAT GAATAACGCT
TTCTACGGCT GTGCTAACCT GCAAATCAGC GCGACGGACG TCCCCGATTT AACCAATGTT
CAGAACATGT CTCAGGCTTT CAGGGGTTGC GCCGTACTGA ACGGCCCTGC CAACATCGGT
AGCTGGAACA CGACCAGCGT GACCAATATG AAAGGCATGT TCCAGGAAGC CAGCGCGTTT
AACCAGAATA TCAATAACTG GAACACCGCC AATGTAAGCA CCATGGTGAG CATGTTTCAG
GACGCGAGGG CTTTTAACCA GCCCGTTGAC ACCTGGAATA TTCAAAATAC AGGCAACATC
AATGCCATAT TCAAGGGCGC CAGCGCATTT AACCAACCGA TTGGTAACTG GAACACCCGG
CAAGTAACAG ATATGAGTTC TGCATTTGAA GACGCAAGCG CATTTAACCA GCCCATTGGC
ACCTGGGATA CCGGGAATGT GACATTAATA TATAATATAT TCAAAGGTGC AAGTGCATTT
AACCAGCCCA TCGGTGCGTG GAATACTCAG AAAGTGAATT TAATGTCTGG TATGTTTAAC
GGCGCCAGCG CATTTAATCA ACCCATCGGC ACGTGGAATA CCGAATCGGT GTGGCAAATG
GACAATATGT TTGCCGGTGC CATTGCCTTT AACCAACCCA TCGGCACCTG GAACGTCGGC
GGTGTGAGTA CTATGGCACA CATGTTTGAT GGCGCCACCG CATTCAACCA GGACATCGGC
GGCTGGAATA CGCAGTATGT GGAGCAAATG GAATATATGT TTTATGGAGC AAGCGCATTT
AACCAGGATA TCAGCGGTTG GAACATCGGT TGGGTATGGA CAATGGAAAA TATGTTCAAT
GGCGCCAGCG CTTTCAACCA GTCGTTAGGG GATTGGACGC TCGGCTGGTC GGTGGGATTA
ACTTCGATTT TCACCAACAG CGGCATGAGC TGCTATGCAT ACACCCAAAC ACTGAAAGGC
TGGAACGACA ATCCTTACAC GCCACATGGA ATTATCCTCG ACGCCACTGG AAGAACGTAC
AGCCCCAGCG TGGTAGGCGC CCGTGACAAT CTGATTACCG CCAAAGGGTG GAGCATCTCC
AACGACGCTG CTTCTGACAC CGAATGCTCG GATGGCCTCC CGGTTACGCT GGTTTCGTTT
TCAGGACAAA AAAACAGTGA AAACCAGCAT GTCTTGAAAT GGACGACAGC CAGTGAGGTG
GATTTTGATC ACTTTGAAAT ACAGCGGTCA GCCGATGCGA GAAGGTTTGA AACAATTGGA
ATGGTCCCCG GCAAATTGGC TGCGACTCCG AATGTCCCTG CAGAATACAG CTTCGTAGAC
CGCGCCACCG GCTCCACCAG CTATTACCGC CTTAAAATGA TCGATCTCGA TGGCTCATTC
GCCTACTCCC GGATCATATC CATCAAAAAT GCGGGGGTGC AGGCATTCGT GGGCAGCTTC
TACCCTAACC CCGCCAGCGG GAAGGTATCG ATCGACGTCG ATGCACTCGA AAGCGGCCAG
TGGACTGTGA GCGTAGTGGA CGCAAGCGGG AAAAGTCTCT CGACAAGCAC ATATTATTTG
CAAAAAGGCA AAAACACACT CAGGCTTGAC CGAAGCACCA CCGGGCTCAA CCTGGTGCGC
TTCGAGTACG GCCTGCTTTT CGAAGTCAGG AAGTTCGTGG GGAAGTAG
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| Protein sequence | MKTLYTILLV LLGQLALAQN EFITRWDLSV SGSGATQLSF NVATSGPVNY TWTEVSPGTA
TGSGAFEGAT ATITDLPAGA TIELSIAPTH FKRIHINNGQ DRKRLLDVVQ WGTVSWASMN
QAFYGCANLQ ISATDLPDLS GVTDMYRMFR GCSLLNGPAN IGEWNTQNVT NMGAVFCEAT
AFNQPIGTWN TANATNLAGM FILARAFNQP IGSWNTSKVT DLTELFFGAS AFNQPVGNWN
VGTVFRMTYM FKDATSFNQT LGTWKLNRSA FLVSMLDNSG MDCYHYGETL IGWAQNPASP
QGTLLSGIGR TYGSADAIAA RKFLIEEKKW VIGGDAASGS ECARPFVTRW DLARSGSGGT
QLSFGVSTSG PVNFTWTAIG AGTPASGLGT FNDGTATITG LPAGATIELR IDPANFRRIN
IGNGPDKQRL NDIVRWGSAG WTSMENAFYG CTNLQISAPD MPDLSTVTSS AAMFRGCSAL
MGPADIGDWN TANVTDMTGM FQDAIAFNQS LGSWELDASV NLSNFLNNSG LSCLNYGETL
KGWEANAATP PGRNLGAVGR TYGTEAENAR EALVTVKGWT INGDGASGSE CSGNFITQWD
LSKTGSGDAQ ISFGVITSGP VGYTWTEISS GTPATGSGTF DNGTAIITGL PAGAMIKVSI
NPANFQGIAI ANGQDKDRLV VVSSWGSTAW ASMNAAFDGC TNLQITAIDL PNLSLVTSMA
SMFRGCAALN SVGNIGSWNV ANVTDMSSLF EGASAFNQNI AGWNTGNVRR MDRMFERAGA
FDQPIGTWHT GQVTDMHSMF ENAASFKQSV GAWNTGNVTD MTAMFKGATA FNQPLGNWKL
NAAVILANFL DDSGLNCINY GETLKGWAAN AATPNGRNLG ALNKTYGTES EDARAYLIAT
KGWTITDDVA SGTNCSGAFV TRWDLSTGGS GTTQLSFEIG VAGTVSYTWK QISSGSSASG
SGTFTTYNAT ITGLPAGATI ELSILPTNFR RININNGQDK NRLVDIVNWG TTAWNAMNNA
FYGCANLQIS ATDVPDLTNV QNMSQAFRGC AVLNGPANIG SWNTTSVTNM KGMFQEASAF
NQNINNWNTA NVSTMVSMFQ DARAFNQPVD TWNIQNTGNI NAIFKGASAF NQPIGNWNTR
QVTDMSSAFE DASAFNQPIG TWDTGNVTLI YNIFKGASAF NQPIGAWNTQ KVNLMSGMFN
GASAFNQPIG TWNTESVWQM DNMFAGAIAF NQPIGTWNVG GVSTMAHMFD GATAFNQDIG
GWNTQYVEQM EYMFYGASAF NQDISGWNIG WVWTMENMFN GASAFNQSLG DWTLGWSVGL
TSIFTNSGMS CYAYTQTLKG WNDNPYTPHG IILDATGRTY SPSVVGARDN LITAKGWSIS
NDAASDTECS DGLPVTLVSF SGQKNSENQH VLKWTTASEV DFDHFEIQRS ADARRFETIG
MVPGKLAATP NVPAEYSFVD RATGSTSYYR LKMIDLDGSF AYSRIISIKN AGVQAFVGSF
YPNPASGKVS IDVDALESGQ WTVSVVDASG KSLSTSTYYL QKGKNTLRLD RSTTGLNLVR
FEYGLLFEVR KFVGK
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