| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0474 |
|---|
| Symbol | surE |
|---|
| ID | 8224040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 536274 |
|---|
| End bp | 537041 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644928351 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_003084908 |
|---|
| Protein GI | 255034287 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.122396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCC TCATTTTAGT TACAAATGAT GACGGAATAA CGTCAAAAGG TATCCGAACA
CTGGTCGAAA TCATGCAAAC GCTGGGCGAA GTAATCGTAG TCGCGCCGAA CAGCCCGCAG
TCGGGAATGG GGCATGCAAT TACCATCGGC GAACCGCTCC GGCTTTATTC CACCCATATT
TTTGACGGCG TTACCGAATA CGAATGCTCC GGGACCCCGG CCGACTGCGT CAAACTGGCG
AAAAACTACG TGTTGCAGGA CCGCAAGCCC GACCTCGTCG TGAGCGGTAT CAACCACGGC
AGCAACAGTT CGATCAGCGT GCTGTATTCC GGCACCATGT CGGCGGCCAT TGAGGCGGCG
ATCGAAGGCA TTCCGGCCAT CGGGTTTTCG CTTTGTGATT TCAGGGAAGA CGCGGATTTC
AGCCACGCCG TCCCGTTCAT CAAATCGATC ACCGAGGAAG CGTTGAAAAA TGGTATTCCA
AACGGTATTG CATTGAATGT GAACATTCCT GCGAAAACCG ACCTGGCACT GAAAGGCGTA
AAAGTATGCC GTCAGGCGCA CGCCAAATGG CAGGAGAAAT TCGACTACCG CGTTGACCCG
AACGGTCGCG GCTACCTTTG GATGGCCGGC GATTTCGTGA ATTTCGATAC GGAAAAAGAA
GATACGGATG TCTGGGCACT GGATAACAAC TACATCTCGG TGGTGCCATG TCAATATGAT
CTGACAGAGT ATGAAGCGTT GAAAAAGCTA TCGACCTGGG ATTTGTAA
|
|---|
| Protein sequence | MKPLILVTND DGITSKGIRT LVEIMQTLGE VIVVAPNSPQ SGMGHAITIG EPLRLYSTHI
FDGVTEYECS GTPADCVKLA KNYVLQDRKP DLVVSGINHG SNSSISVLYS GTMSAAIEAA
IEGIPAIGFS LCDFREDADF SHAVPFIKSI TEEALKNGIP NGIALNVNIP AKTDLALKGV
KVCRQAHAKW QEKFDYRVDP NGRGYLWMAG DFVNFDTEKE DTDVWALDNN YISVVPCQYD
LTEYEALKKL STWDL
|
|---|
| |