Gene Dfer_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0455 
Symbol 
ID8224021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp518448 
End bp519755 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content54% 
IMG OID644928332 
Productcatalytic domain of components of various dehydrogenase complexes 
Protein accessionYP_003084889 
Protein GI255034268 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.370152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA TTGAAATGGT AATGCCTCCG ATGGGGGAAA GCATCATGGA ATGCACCGTG 
CTTCACCTGC TTGTAGAAAC AGGGGCGAAG GTGCGTATCG ATGATTCCAT TCTGGAAGTG
GCAACCGATA AAGTAGATAC CGAAGTCCCA TGCCCCTACG ACGGCACGCT CGTGAAATGG
CTTGTGGAAG TGAACGACGT GGTGCCGATC GGTAGCGCGG TAGCACAAAT AGAGGTAGCC
GACGATGTGG TGGCCCTCGA AACCGAAACG CCCCCGCTGG CGGCCGTGGA AGAAGAGGCG
GACGTTGCAG AAACGGCCGC ATTGCTCGAA AAGGATTTTC AAACGGCCGT GACGCGCACC
GCCGAGCCTG CTTATGAATA TGCCCCGGCC CATGGCGAAG TAAATTCGTT TTACTCGCCG
CTCGTGCTCA GCATTGCGCG CGAGGAGCAT ATCCCGGTGG ATGAACTGAA AGTCATTAAA
GGAAGCGGCC TCGAAAACCG GGTGACGAAG GACGATATTT TATCCTATGT CGAACATCGC
CGCAAAAAAG GTGTGAACGT TACGCCGGCC GCTGTTCCGG CGACTTCGCT GAACGGCAGC
AACGAAATCA TCGAAATGGA CCGTATGCGG AAAATGATCT CGCAGCGGAT GGTCGATTCG
AAACGCATTT CGGCGCACGT AACATCATTC ATCGAAACCG ACATGACGCC CGTGGTAGGC
TGGCGGGAGC ATGTGAAGGC CGAATACCGG AAAAAAACCG GCGACAGTAT TACATTCACG
CCGATCCTGA TCGAGGCCGT TGCCAAAGCC ATTCAAGATT ACCCGCTGAT CAACATTTCG
GTGGAAGGCG ACAAGATTAT CAAAAAGAAA GACATTAATA TAGGAATGGC CGTAGCATTG
CCGGACGGTA ACCTGATTGT GCCGGTAATC CACAATGCCG ACCGTTACGA CCTGCCCGGC
CTCGCCCGCA AAGTGAACGA CCTCGCCAAG CGTGCCCGCG AAAACCGCCT GAAAGCCGAC
GACCTCGCCG GGGGCACCTA CACCGTTTCG AACATCGGCG CATTTTCCAA CCTCATGGGC
ACGCCGATTA TCGTACAACC GCAGGTGGCG ATCATGGCAT TCGGTGCGAT AAAGAAAAAA
CCGGCGGTGA TAGAAACGCC GCAGGGCGAC CTGATCGGCA TCCGCAGCAT GATGTTTGTC
TCGCATTCGT ACGACCACCG GGTGGTAGAT GGCTCGCTGG GTGGCCTGTT CCTGAAACGC
GTAAACGATT ACCTCGAAAA CTTCGACATT AGCCGAACCA TTATCTGA
 
Protein sequence
MKVIEMVMPP MGESIMECTV LHLLVETGAK VRIDDSILEV ATDKVDTEVP CPYDGTLVKW 
LVEVNDVVPI GSAVAQIEVA DDVVALETET PPLAAVEEEA DVAETAALLE KDFQTAVTRT
AEPAYEYAPA HGEVNSFYSP LVLSIAREEH IPVDELKVIK GSGLENRVTK DDILSYVEHR
RKKGVNVTPA AVPATSLNGS NEIIEMDRMR KMISQRMVDS KRISAHVTSF IETDMTPVVG
WREHVKAEYR KKTGDSITFT PILIEAVAKA IQDYPLINIS VEGDKIIKKK DINIGMAVAL
PDGNLIVPVI HNADRYDLPG LARKVNDLAK RARENRLKAD DLAGGTYTVS NIGAFSNLMG
TPIIVQPQVA IMAFGAIKKK PAVIETPQGD LIGIRSMMFV SHSYDHRVVD GSLGGLFLKR
VNDYLENFDI SRTII