Gene Dfer_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0454 
Symbol 
ID8224020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp517915 
End bp518448 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content50% 
IMG OID644928331 
Product5 nucleotidase deoxy cytosolic type C 
Protein accessionYP_003084888 
Protein GI255034267 
COG category[S] Function unknown 
COG ID[COG4502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.451871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAT TGACCCTGGA CATGGACGAT GTGCTGGCGA ACACCCACGA AAAGCTCGTC 
GACATTGTTC TCGCCGACTT TTCGACCACA TTGAACAGAC CGGATTTCCA GACAAAGGGC
TTGCGGGAAC TGCTGCATCC GAAACAGCTT TCGAAGCTGC ACAAGATCAT GGACTCACCC
GGTTTTTTCG CGGATATCAA AGTGAAGGAC GACGCCGTGG AGACGGTTCA CAAGCTTTCC
AAATATTACG AACTGTTTGT GGCCACCGCG TGCATGGAAT TCCCTAACTC CTTCCGCGAT
AAGTTCGACT GGTTGAAAAA GCATTTCCCA TTTATCCCGT GGACGAATGT AGTTTTCTGT
GGGTATAAAA GCATTATCCA GTCCGATTAC CTGATCGACG ACCACGTGCG CAATCTGGCG
GCGTTCAAAG GCAAAGGCAT TCTTTTTTCA TCCCCGCATA ATCTTCGCGA AACGGCCTAT
CAGCGCGTTT CGAGCTGGAA GGAAGTGTCG GAACTATTTT TGCACAGCGT ATGA
 
Protein sequence
MLRLTLDMDD VLANTHEKLV DIVLADFSTT LNRPDFQTKG LRELLHPKQL SKLHKIMDSP 
GFFADIKVKD DAVETVHKLS KYYELFVATA CMEFPNSFRD KFDWLKKHFP FIPWTNVVFC
GYKSIIQSDY LIDDHVRNLA AFKGKGILFS SPHNLRETAY QRVSSWKEVS ELFLHSV