Gene Dfer_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0433 
Symbol 
ID8223999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp493474 
End bp494685 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content52% 
IMG OID644928310 
Productaminotransferase class-III 
Protein accessionYP_003084867 
Protein GI255034246 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.282694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTT CACATCGCCA GCACTTTTTC GACCATCTGG CGCAGACTTC CGATTTTCCC 
CTTGCACTCG AAATTGAAAG AGCGGAGGGC GTTTATATGT ACGGTCCGGA CGGTAAATCG
TACATGGACC TTATTTCCGG CATCGGCGTG AGCAACGTCG GCCACCGGCA CCCGAAAGTG
CTTGAAGCCA TTCATAAGCA GCTCGACAAG CACATGCACC TGCTCGTGTA CGGCGAATAC
GTGCAAAGCG CGCAGGTACA ACTTGCAAAA GCATTAGCCG ACACCCTGAA ACTGAATGCC
GCCCACCCCT CGCCTTTCGG CCTGATCGAC AATGTGTATT TCACTAATTC GGGCACCGAA
GCGGTGGAAG GAGCTATGAA ACTGGCTAAA CGATTTACCA AAAGGCGGGA ATTTATTTCC
TGCTACAATG CCTACCATGG CGCTACGCAG GGCGCATTGA GCCTGGCTGG TGCGGAGTTT
TTCAAACGAA ACTTCCGGCC GCTGCTACCG GGCGTGAAGC ACATTCGTCA CGGCTATTTA
CCTGATTTAG AAAAAATTAC CACCGAAACT GCCGCTGTGA TCATCGAGGT GATCGGCGGA
GAATCGGGCG TTCGTGTGCC GGATGCGGAC TACTTAGTGG CATTGCGCCG GAAATGCACC
AAGACAGGCA CTTTGCTCAT TTTAGATGAA ATTCAAACTG GCTTCGGCCG GACGGGAAGC
TTTTGGGCAT TCGAGCAACA TGGAATTTAC CCGGACATTT TGCTGAGTGC AAAAGGAATG
GGCGGCGGCA TGCCGATCGG GGCTTTCATG GCTTCCCAGG AGGTGATGAA GGTACTGAAA
ACCAACCCAA TACTTGGCCA TATCACCACT TTTGGCGGGC ACCCGGTGAG CTGCGCGGCA
TCGCTGGCTG CTTTGAATGT AACCATCGAT GAGCGCCTTC CCGAAGGAGC AATCCAAAAG
GGTGAACTAT TCAAATCCCT GCTGATTCAT CCCGAAATCA AGGAAATACG GGGAAAGGGC
CTTATGCTTG CGGCGGAAAT GGAATCGTTC GACAAGCTGA AAGCGACCAT CGACCGATGC
ATTGAACTCG GCGTCGTTAC CGACTGGTTC CTTTTTTGCG ATAATTCCAT GCGCATTGCC
CCACCGCTGA CCATAACCGA AGAGCAGATC CGCGAAGCAT GTGCGACCAT TATCAATGTC
CTGAATTCTT GA
 
Protein sequence
MHISHRQHFF DHLAQTSDFP LALEIERAEG VYMYGPDGKS YMDLISGIGV SNVGHRHPKV 
LEAIHKQLDK HMHLLVYGEY VQSAQVQLAK ALADTLKLNA AHPSPFGLID NVYFTNSGTE
AVEGAMKLAK RFTKRREFIS CYNAYHGATQ GALSLAGAEF FKRNFRPLLP GVKHIRHGYL
PDLEKITTET AAVIIEVIGG ESGVRVPDAD YLVALRRKCT KTGTLLILDE IQTGFGRTGS
FWAFEQHGIY PDILLSAKGM GGGMPIGAFM ASQEVMKVLK TNPILGHITT FGGHPVSCAA
SLAALNVTID ERLPEGAIQK GELFKSLLIH PEIKEIRGKG LMLAAEMESF DKLKATIDRC
IELGVVTDWF LFCDNSMRIA PPLTITEEQI REACATIINV LNS