Gene Dfer_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0423 
Symbol 
ID8223989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp484163 
End bp485140 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content51% 
IMG OID644928300 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003084857 
Protein GI255034236 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA TCCTAACAGG CATTCAAAGC AGCGGGCGAC CTCACCTGGG TAACATCCTG 
GGAGCCATCA AACCTGCGAT CGAACTCTCT AAAAACCCAC AGAACGAATC TTTTTTCTTC
ATTGCCGACC TCCATTCGCT CACCACGCTG AAAAACGGCA CTGAACGCGT CGAGTACGTC
CGCGCCATTG CCGCTACGTG GCTCGCATTC GGTTTCGACT ATAAAAAGAA TGTTTTCTGG
CGGCAGTCGC GCGTGCAGGA GCATACCGAG CTGGGCTGGT ACCTCAACTG CTTCACGCCG
TTCCCGATGC TGGCCAATGC GACGTCTTTC AAAGACAAGT CTGAGAAACT GGCCGATGTG
AATGCGGGAC TCTTCACCTA TCCGGTTTTG CAAGCGGCTG ATATTCTGCT ATATAATGCC
AATATTATCC CGGTCGGGAA AGATCAGAAG CAGCACCTTG AAATGACCAA GGACATCGCC
AACAGATTCA ATATCCTGGC CGGCGAGGAA ATCCTGGTGC TCCCTGAGCC GCAGATCGAC
GAGCGCATTA TGACCATTCC GGGCCTCGAC GGGCAGAAAA TGAGCAAGTC GTACCATAAC
TACATCGACA TTTTCCTCCC CGAAAACGAA CTGAAAAAGA TCACCAAAAA GATCCTATCC
GATTCCAAAG CGCTGGAAGA GCCCAAAGAT CCCGATTCCG ACATCACTTT CCAGCTTTAC
AGCCTTGTGG CAAGCGAAGC GGATGTCGAA ACCATGCGCA GCAACTACGT CAATGGCGGC
TACGGTTACG GCCATGCCAA GCAGGCGCTT TTTGAATGCT TTATGGACGT TTTCGCCGAG
CCGCGGCGTA TTTTCAATTA TTATATGGAA AATACCGAAG AGCTCGAAAG CATTCTTGTC
GAAGGCGAGG CCAAAGCCCG CGATATCGCG CAGGATACGA TCGGAAAGGT TCGGAAAGTA
CTCGGTTTCA GTTCATGA
 
Protein sequence
MARILTGIQS SGRPHLGNIL GAIKPAIELS KNPQNESFFF IADLHSLTTL KNGTERVEYV 
RAIAATWLAF GFDYKKNVFW RQSRVQEHTE LGWYLNCFTP FPMLANATSF KDKSEKLADV
NAGLFTYPVL QAADILLYNA NIIPVGKDQK QHLEMTKDIA NRFNILAGEE ILVLPEPQID
ERIMTIPGLD GQKMSKSYHN YIDIFLPENE LKKITKKILS DSKALEEPKD PDSDITFQLY
SLVASEADVE TMRSNYVNGG YGYGHAKQAL FECFMDVFAE PRRIFNYYME NTEELESILV
EGEAKARDIA QDTIGKVRKV LGFSS