Gene Dfer_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0409 
Symbol 
ID8223975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp469222 
End bp469950 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content55% 
IMG OID644928286 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003084843 
Protein GI255034222 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.252597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCA AAACAGTATA TAAGGGCATG AAAGTATATC AAATAGCAAT CCTGCTTTGC 
ATGCTGGCTT GCGGCGGCAC ACAAAGCCCC GGACCATCGG CTCCCGCCGG CACTGACCCG
ATTGAAGAAT CGGGCAAGCC GCAATACCTG GCCCTGGGCG ATTCCTATAC GATCGGGCAG
AGTGTGGCGC CCGACGAGCG GTGGCCTGTG ATATTGGCAG ACGAACTCAA AAAAGCGGGC
AAGCCAGTGG CCACGCCGAA GATCGTCGCC CGCACGGGCT GGACCACGCG CAACTTGCTC
GACGCATTAG AACAGAGCCC TCCCACCGGC ACGTTCGACC TTGTGTCGTT GCTTATCGGC
GTAAATAACC AGTACCAGGG CAGAAATAAG GAAGAATACC GGATCGAATT CCGACAGCTT
TTGCAGCAGG CGATTGCGTA CGCCGGCGAC GATGCCGGTA ATTTATTCGT GCTATCCATT
CCCGATTGGG GCGTTACCGC CATCGGCGAA GGCAACCGTG AGCACATAGC CGCCGAAATC
GACAGCTTCA ACGCCATTGC GAAGGAGGAA TGCCAGAAAC TCAAAATCGT TTTCATCGAC
ATTACACCAA TATCCCGCAA AGCACTCAAC GACCCTACGA TGATTGCGAG CGACCAGCTG
CATTTCTCGG GCAAAATGTA CCGGCTATGG GTGAATGAAG CCCTTCCGAG GGTGAGGCAG
CTGTTTTAG
 
Protein sequence
MGSKTVYKGM KVYQIAILLC MLACGGTQSP GPSAPAGTDP IEESGKPQYL ALGDSYTIGQ 
SVAPDERWPV ILADELKKAG KPVATPKIVA RTGWTTRNLL DALEQSPPTG TFDLVSLLIG
VNNQYQGRNK EEYRIEFRQL LQQAIAYAGD DAGNLFVLSI PDWGVTAIGE GNREHIAAEI
DSFNAIAKEE CQKLKIVFID ITPISRKALN DPTMIASDQL HFSGKMYRLW VNEALPRVRQ
LF