Gene Dfer_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0407 
Symbol 
ID8223973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp467818 
End bp468822 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID644928284 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003084841 
Protein GI255034220 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.592712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATA CAGACATTTG CATAATCGGC GCCGGGCCCG TTGGCCTGTT CGCCGTCTTC 
GAGGCCGGAC TGCTCAAAAT GCGTTGCCAC CTTATCGACG CGCTGCCGGT AGTAGGCGGC
CAGCTTGCCG AGATTTATCC TCAAAAGCCC ATTTACGACA TTCCCGGCGC CCCGGCCATT
ATCGCCGAAG ACCTCGTGAA CAACCTCATG AGGCAGATCG AGGAGTTCAA ACCCGGTTTT
ACATTGGGCG AAAGGGTAGA AGCGCTGGAA AAGCAGGACG ACGGCAGCTT CATCGTCCGC
ACCAATGAAG GCACCGGCGT GCATTGCCAG GTAGTGGTGA TCGCAGCCGG ACTGGGCAGC
TTCGAGCCGC GGAAGCCGGC GGTGGAGCAG CTGGAATATT TCGAAGGCAA GGGCGTGCAT
TATATGGTTA AAAAGCCCGA GCAGTTCCGC AACCGGAAAG TAGTACTGGC TGGCGGCGGT
GACTCCGCAC TCGACTGGAC GATCTTCCTT GCCGACGTGG CCGAACGCGT CACGCTCGTG
CACCGCGGCG ATACATTCCG CGGCGCGCCC GATTCCGCCG AAAAAGTGTA CGAACTGGCC
GGAAAAGGTA AAATTGACCT TATCCTGCAA TCCCAGGTGA ACAAACTCGG CGGAAATGGC
GTGCTCAAAG AAGTATCCGT GCTAGGGAAT GACAAATCGC TCATCACCAT TCCTACCGAC
GATTTCATCC CGCTTTTCGG CCTGAGCCCA AAGCTAGGAC CCATTGCCGA CTGGAACCTG
GGCGTCGAAA AATCGGCGGT GGTGGTCGAC ACATTCGATT ACTCTACAAA CGTCGAACGC
ATTTACGCCA TTGGCGACAT CAACACTTAC CCGGGTAAGC TGAAACTCAT TTTATGCGGT
TTCCACGAAG CGGCCATCAT GATGCAAAGC GCATTCAAGT ACGTTTACCC CGACCAGAAA
CTAAGCTTCA AATACACCAC GGTTAACGGT GTTAATCCAT TTTAG
 
Protein sequence
MIHTDICIIG AGPVGLFAVF EAGLLKMRCH LIDALPVVGG QLAEIYPQKP IYDIPGAPAI 
IAEDLVNNLM RQIEEFKPGF TLGERVEALE KQDDGSFIVR TNEGTGVHCQ VVVIAAGLGS
FEPRKPAVEQ LEYFEGKGVH YMVKKPEQFR NRKVVLAGGG DSALDWTIFL ADVAERVTLV
HRGDTFRGAP DSAEKVYELA GKGKIDLILQ SQVNKLGGNG VLKEVSVLGN DKSLITIPTD
DFIPLFGLSP KLGPIADWNL GVEKSAVVVD TFDYSTNVER IYAIGDINTY PGKLKLILCG
FHEAAIMMQS AFKYVYPDQK LSFKYTTVNG VNPF