Gene Dfer_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0406 
Symbol 
ID8223972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp466805 
End bp467707 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content55% 
IMG OID644928283 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_003084840 
Protein GI255034219 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA CAACCCTTTT GCACAACCCC ACAGCCGGGG ATAACGATTT TTCGAAAAAA 
GAGCTGCTGA AAATCATAAA AAAAGAAGGT TTCGAATGTG AGTACGCCTC CGTGAAGGAG
GAAGGCTGGG ATGAATTCGA AGAGAAAACC GACTTTTTGA TCATCGCGGG CGGGGACGGC
ACCGTACGGC GCGCGGCCAA GGCCCTGATG CAGCGCAAGC GGCTCGACAA GCAATTTCCG
CTCGCGTTGC TGCCGCACGG CACGGCCAAC AACATTGCTA CCGCCTTGCA GATCGAGGGG
CATCCCAAAG ACATTATCCC GCATTGGCAT CACTATAAGC TGCAACCTTT CGACATCGGC
CGCGTGCACG GCGTGCGCGA CGATCTGTTT TTCCTCGAAG CATTTGGCTA CGGCATTTTT
CCACGGCTGA TGAAGGTGAT GGATAAAATC GAAGGGGATA TCGGCGACAC CGCGGAAGAA
AAGCTGAAAG CGGCGCGGGC CGTGCTGCTG GAAATCGTGC AAACCTACGA GGCCCGGCCA
TGCACGATCG TGGCCGACGG CGTGGAGCAT TCGGGCAATT ATATTATGGT GGAAGTTATG
AATATCCGCT CCATCGGGCC TAACCTCGTG CTCGCCGGCA CGGCCGACCC CGGCGACGGC
TGCCTGGATG TGGTGATGGT TTCCGAAGCG AGCCGCAATA AATTCGAGTC GTTCCTGCTC
AGCCGCATTA ATGACGAGGA CAAGGAGTTC AGCTTCTCCA CCATCCGGGC CAAAAAAGTG
AAGATATTCT GGGACGGTAA GGACGCACAC GCCGACGACG AGCGGTTGAA ACTGGAAAAG
CCCGTCGAAG TGGAAATCGA GGTGCTGCCC GATATGCTCC AATTCATGAT CACCGAATCC
TGA
 
Protein sequence
MKRTTLLHNP TAGDNDFSKK ELLKIIKKEG FECEYASVKE EGWDEFEEKT DFLIIAGGDG 
TVRRAAKALM QRKRLDKQFP LALLPHGTAN NIATALQIEG HPKDIIPHWH HYKLQPFDIG
RVHGVRDDLF FLEAFGYGIF PRLMKVMDKI EGDIGDTAEE KLKAARAVLL EIVQTYEARP
CTIVADGVEH SGNYIMVEVM NIRSIGPNLV LAGTADPGDG CLDVVMVSEA SRNKFESFLL
SRINDEDKEF SFSTIRAKKV KIFWDGKDAH ADDERLKLEK PVEVEIEVLP DMLQFMITES