| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0403 |
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| Symbol | |
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| ID | 8223969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 462101 |
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| End bp | 464422 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928280 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003084837 |
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| Protein GI | 255034216 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.572265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT ACCGTTATCC CCTCTTGATC CTGGCGGTTT CGTCTCTGTT GGTGTATTGT
AAAACCAACA AGCAAACCAC CCAGCAAACC GCATCTTCCA CCACTTCGAC GGTGGCGAAA
GAAGAAAAAC CTGCCCAGGT ACCCGGCAAA TCGCCATTCA TACCCGCTTC CGAAACGATC
GGCAAGATGG TGATCGAAGA TGGTTTTGAA GCAAAACTCA TCGCATCCGA GCCGCTCGTG
AGCGCACCGG TGGCCATGCA GTTCGACGAC AAGGCCCGCA TGTGGGTGGT GGAAATGGTA
GGTTACATGC CCGACACCGT TGGCACCGGC GAGGATATTC CCAACGGGAA CATCGTAATC
CTCGATGATA AAAATAAGGA CGGCGTGTAC GACGACCGCA AAGTGGTGAT CGACTCGCTC
GTGCTGCCGC GCGCGATCTG CCTGATCGAC AACGGCATTC TCGTGGCGGA ACCTACCAAC
CTGTGGTTCT ATGAACTGAA AAACGACCAG GTAGTGAAGA AAACGCTGGT AGATCCGAAA
TATACCGAGG GCGGTAATGT GGAGCACCAG CCCAACGGCC TGCTGCGCGC GATGGATAAC
TGGATTTACA ATGCCAAATC CGATAAGCGC TATCGTCGGA TCGGTGGCAA ATGGGTCATC
GAGCACACGC ATTTCAGGGG CCAATGGGGT ATTTGCCAGG ACAATTACGG ACGGTTGTAT
TATAACAACA ATTCCCAAAA CCTGCTCGGC GATTATCTTC CGGCCGGTTT GGGTGCCTGG
AACAAGAACC AGCGCGGCGT GGCGGGTTAC AACGAAAAAT CGGTGGCCAA CAATAAGGTC
TACCCGCTCC ACCCCACCCC CGGCGTGAAC CGCGGGTACA TGAAAAACGT CCTCGACGAC
AGCCTGCGCC TGAACGAGTT CACAGCGGCG GCCGGTCCGG TGATCTACCG CGGCGACCTG
TTCGGCAAAA ACTTCGATTT CAACGCATTC GTGCCGGAGC CTTCCGCCAA CCTCATCAAA
CGCAATGTCC TGAATGAGAA TGGATATGTC GTGAAAGGCG ATATCGCGTA CAAAGGCAAG
GAATTCCTCG CCAGCACCGA CGAGCGCTTC CGGCCGGTGA GCCTGTATAA TGCCCCCGAC
GGCAGCCTGA TCGTACTCGA CATGTACCGC GGCATTATCC AGCACAAAAC TTACCTCACG
CCTTACCTGA AAGACCAGAT CGGCAAGCGC GACCTCACGC AGCCGCTTTC GGCAGGCCGC
ATTTATAAGA TTGTCCCAAA AGGTGCCAAA GCCAAGCCGG TAACCGTGCC CGACGGCGCG
CAGGAGCTGG TGAAGCTGCT CGGCCACCCG AACGGCTGGG TCCGCGACCG TGCACAGCAA
AAACTGATCG ACGGTAAGTA CAACCAAACC GTGCCCGCAC TCCGCGAAGC CATTAAGCAA
ACGGCCAACC CGTTGCTGGC GGTCCACGCA CTGTGGACGC TCGAAGGGCT GAATTCGCTG
AAACCGGAAG AGGCATTGAG CTGGATCAGG CAGTCGAACT GGACGTTCCG TGCACAAGGA
CTTTACGCAT CGGCGGCGGT AATCACGCCC ACTTCCTATC AGCAGTTCGC GACCGTATTC
GACGGCATTG CCGACTCCGG CGACACGCTG GCGGCCCCTT ACATTGCATT GCTGGCCAAG
AGCATTGACA AATTCGATCA AAATCTTTCA AGGGGCCTGC TGAACAAGCT GGCGGGCAAA
TATCCTAACA ACCGGTACGT GTCCGACGCG ATCATCAGCA ACTTGCAGGA TCAGGAAGAA
ATGTTCCAAT CGGCCATTGC CAGCTCCGTT TCCGATCCGA ACGCGGTGCT CAACAAGCAG
CTCACCCGCG TGGTCACGGC CGTTCGCACT GCGCAAGGCA ACCGGAACCC CGAGATGCTG
AAAAAGGAAT TTCCCAAAGG CGAAGCATTG TTTACCTCCG TTTGCCAAAC CTGCCACGGG
GCCGATGGCG GTGGTGTGAA ATCGCTCGCG CCACCGTTGA ACCAGTCGGA ATGGGTCACG
GGAAGCAAGG AAAGACTCAT TTCGATTGTC CTTTTCGGTC TCACCGGGCC TGTAAAAGTG
AACGGCCACG TATATCAAAC ACCCGAAGTA AGCGGCGATA TGCCCGGCAT CGGCTACGAT
AAAGACATGC CGAACGAAGA CATTGCACAG CTGCTAAGCT TCATCCGCCG CTCCTGGCGC
AACAATGCCG ACCGCGTAAC CACCGAGGAA GTGACCAAAG TACGCACCAA ACTCACCGGC
CGCGAAAAAG CATTCACCGA AGCCGAGCTA AATGGCATTT GA
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| Protein sequence | MKKYRYPLLI LAVSSLLVYC KTNKQTTQQT ASSTTSTVAK EEKPAQVPGK SPFIPASETI
GKMVIEDGFE AKLIASEPLV SAPVAMQFDD KARMWVVEMV GYMPDTVGTG EDIPNGNIVI
LDDKNKDGVY DDRKVVIDSL VLPRAICLID NGILVAEPTN LWFYELKNDQ VVKKTLVDPK
YTEGGNVEHQ PNGLLRAMDN WIYNAKSDKR YRRIGGKWVI EHTHFRGQWG ICQDNYGRLY
YNNNSQNLLG DYLPAGLGAW NKNQRGVAGY NEKSVANNKV YPLHPTPGVN RGYMKNVLDD
SLRLNEFTAA AGPVIYRGDL FGKNFDFNAF VPEPSANLIK RNVLNENGYV VKGDIAYKGK
EFLASTDERF RPVSLYNAPD GSLIVLDMYR GIIQHKTYLT PYLKDQIGKR DLTQPLSAGR
IYKIVPKGAK AKPVTVPDGA QELVKLLGHP NGWVRDRAQQ KLIDGKYNQT VPALREAIKQ
TANPLLAVHA LWTLEGLNSL KPEEALSWIR QSNWTFRAQG LYASAAVITP TSYQQFATVF
DGIADSGDTL AAPYIALLAK SIDKFDQNLS RGLLNKLAGK YPNNRYVSDA IISNLQDQEE
MFQSAIASSV SDPNAVLNKQ LTRVVTAVRT AQGNRNPEML KKEFPKGEAL FTSVCQTCHG
ADGGGVKSLA PPLNQSEWVT GSKERLISIV LFGLTGPVKV NGHVYQTPEV SGDMPGIGYD
KDMPNEDIAQ LLSFIRRSWR NNADRVTTEE VTKVRTKLTG REKAFTEAEL NGI
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