Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0399 |
Symbol | |
ID | 8223965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 457939 |
End bp | 459375 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644928276 |
Product | putative L-arabinose isomerase |
Protein accession | YP_003084833 |
Protein GI | 255034212 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.860372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA ATCGATATGC GCTGCGGGTG GGCCTGTTCG GCATTGGCTT GGAGGCATAC TGGGATCAGT TTGAAGGTCT TGAAGCACGG TTGAAAGGTT ACGTCGATGT GGTAGCCGAA AGGCTCGGTG GTTACGGGGC CGAAATTGTA AACCTGGGGC TGATAGATAC GCCCGAAAAG GCATTGGCGG CGGGTCATCA GTTCCGGAGA GAGGATGTAG ACCTTATTTT TCTTTATGTG ACGACTTATG CATTGTCGTC CACCGTGCTG CCGGTCGTTT CACGTGCCAA AGTGCCGGTG ATAGTCCTGA ACCTCGCGCC GGAGCCGGCA ATTGACTACC AAAGGTTCAA TGCAATGAGT GATCGCACTC GCATGACGGG GGAATGGCTT GCCTATTGCT CGGCCTGCCC TGTACCGGAG ATAGCGAACG TGTTCCGCCG TGCAGGCATT CCTTTTTACC AGATCACCGG CACCTTAAAC AGCGACCCGG AGGTGTGGCA GGAAGCGCGT GAATGGATCG AAGCGGCCGG CGTGGCGCAC ACCATGTCGC ATAACCGCCT GGGCGTGATG GGTAATTACT ATGGCGGGAT GCTCGATATT TATTCCAACT TCACATTGCA ATGCGCTACA TTCGGCGGGC ATATCGAGAT CATCGAGGTC GACGAGCTTT CGGCGGTGCG GGAGGCCGTT TCGGAGGCCG AGGTACTCAC CATGATCGCG ACCTTCGAAA ATACGTTCGA CATTCAGGAA GATTGCCCGG AGTTCGAAAT TCACAGGGCT GCGAGAACCG CCGCCGCATT GGAAAAATTG GTTGAAATAC ACCAGCTTGG CTCGATGGCG TATTACCACA AGGGCACGGG CAGCGCTCAG AATGAGGATA CCATGAGCTC AGTTATTCTC GGCAATTCGC TGCTTACGGC CCGTGGGATT CCGGTGGCAG GTGAGTATGA AGTTAAGAAT GCTCAGGCGA TGAAAATCAT GGATAGCTTC GGTGCGGGCG GCTCGTTTAC AGAGTATTAT GCGATGGATT TCAATGCAGA TGTGGTGCTG ATGGGACACG ACGGACCAGG CCACATCGCG ATTGCAGAAG GTAAAACAAA GGTGAAGCCG TTATATGTCT ATCACGGAAA AGTGGGGAAC GGCCTATCTG TAGAGATGAG CGTCGCACAC GGACCGGTTA CATTGCTGTC GGTGGTGGAA ACGGTGGAAG GAAAGGTGAT TTTGCTGGTG GCAGAGGGCG AGTCGGTGGC AGGGCCTGTT CTGGAAATAG GTAATACCAA CAGCCGATAC CGTTTTACGA TCGGCGCCAA ACGCTTTACC GAGCAATGGA ACAGCCACGG CCCGGCACAC CATTGCGCGG TGGGAATCGG GCACATTGCT TCCAAAATTG AAAAGCTGGG TAGGTTGCTG AACATCGAAA CGGTGACCGT TTGCTAA
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Protein sequence | MKQNRYALRV GLFGIGLEAY WDQFEGLEAR LKGYVDVVAE RLGGYGAEIV NLGLIDTPEK ALAAGHQFRR EDVDLIFLYV TTYALSSTVL PVVSRAKVPV IVLNLAPEPA IDYQRFNAMS DRTRMTGEWL AYCSACPVPE IANVFRRAGI PFYQITGTLN SDPEVWQEAR EWIEAAGVAH TMSHNRLGVM GNYYGGMLDI YSNFTLQCAT FGGHIEIIEV DELSAVREAV SEAEVLTMIA TFENTFDIQE DCPEFEIHRA ARTAAALEKL VEIHQLGSMA YYHKGTGSAQ NEDTMSSVIL GNSLLTARGI PVAGEYEVKN AQAMKIMDSF GAGGSFTEYY AMDFNADVVL MGHDGPGHIA IAEGKTKVKP LYVYHGKVGN GLSVEMSVAH GPVTLLSVVE TVEGKVILLV AEGESVAGPV LEIGNTNSRY RFTIGAKRFT EQWNSHGPAH HCAVGIGHIA SKIEKLGRLL NIETVTVC
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