| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0397 |
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| Symbol | |
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| ID | 8223963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 455347 |
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| End bp | 457188 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928274 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_003084831 |
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| Protein GI | 255034210 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.714045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTACG ATCATTTATT AGTGCAGCGT CCGGGTGTGA CCTTTGACGA AACCGGCGAA
GCACATGTGC TGGTGTGGGC GCCCGAAGCC GAAAAAGTAC AATTGAAACT GGATAAAACG
GATCACCTGC TGGATCTGGA AAAAGAGGGC TATGGATTCT GGAAGCTCGA AACACGGGCG
CTAGCGCACG GCCAGCAGTA CAGCTTCCTG CTCGACGGCG AAGGCCCGTT TCCCGACCCT
GCCACGCTCC ACCAGCCCAA TGGTGTACAT GGAGCGTCGG AAGCATTTGA TCCGCAGCAG
TTCCGTTGGA CGGACGACAG CTGGACGAAC CTCCCGCTGA AAGAATACAT TATTTATGAA
CTGCATGCCG GCACATTCAC ACCCGAAGGC ACATTTGCCG CCATGGAGGC CAAGCTCGAT
CACCTGGTGG AATTGGGTGT GAACGCGATT GAAATCATGC CCGTGTCACA GTTTGCGGGA
GGCCGGAACT GGGGCTATGA CGGCGTGTTC CCGTACAGCG TGCAGGACAC TTATGGCGGC
CCGGCGGCTT TGCAGCGGCT GGTGAATGCC TGTCATGAAA AAGGGATCGC CGTGGTGCTA
GATATGGTGT ACAATCACCT CGGGCCGGAA GGTAATATCC TGGGTAAGTT CGGGCCTTAT
TTTACCGATA AATACCACAC GCCCTGGGGC GACGCGGTCA ATTTCGACGA TGCGTGGTCG
GACGGTGTGC GGCATTATTT TGTGCAGAAT GCATTGATGT GGTTCCGCGA TTTCCATATC
GACGGCCTGC GCCTCGATGC CGTGCATGCG ATCAAGGATT TCAGCCCTGT TCACATTTTA
CAGGAGATCA GGGAAAAGAC GAATGCGCTC GGTACCGGAC GGGAGCATTA CCTGATCGTC
GAAATGGACC TGAACGATAC GCGCTACGTG AAGCCCACCG AAACGGGTGG CTACGGAATG
GACGCGCAGT GGATCGACGA GTTTCACCAT GCATTGCGCG TGAGCTCGGG CCAGGAGCGG
AGCGGCTACT ATTCCGATTT TGAAGGAGTG GCCTCGCTGG CCAAGTCCTT CCGCGACGCT
TATGTGTTCG ATGGTATCTA CTCCGATCAC CGGAAACGCA AGTTCGGCAT GAAGGCCGAC
GGCATTCCCG GCGGGCAGTT TATCGTTTTT TCCCAAAACC ACGACCATAT CGGCAACCGC
ATGCTCGGCG AGCGCACGAG CCAGCTCGTG AGCGCCGAAA TGCAGAAGCT CCTGGCCGGC
GCGGTTTTCG TGAGCCCGTT TGTTCCCTTG CTGTTTATGG GCGAGGAATG GGCCGAGCCT
AATCCATTCC AATATTTCGT GAGCCACACG GAAAAGGAAT TGGCGGATGC GGTCCGCAAG
GGCCGCAAAG CCGAATTCGC GGCATTCCAC GCCGAGGGCG AAGCGCCCGA TCCCGTGGCC
GAATCCACAT TTGAAAATTC GCGTGTGCAA TGGCATTTGT TGCAGGAAGA GCCGCACCGG
ACCATGCTGG CCTATTACCG CCAATGGATC GCCCTGCGGA AAAGCGAGCA GGTTTTACGG
GAATGCGACC GCAATGGATT GTCGGTTGAG GTAGCCGAGG GAAAAGAATC GATTGTAATT
CAGCGGGTGT GGGAGCGGCA GCATCTGGTG GCTTTCCTCA ATTTCTCGAA AGCGCCGCAG
GAAGGACTGC TGCCTTACGA ACACCTGGCC TGGAAAAAAC TGATCGCATC TTCGGACCCG
GATTGGAATG GCCCGCGGGA AATGCCTGCA CAGGCCGGGG CAGGTGCACT GTCATTGCCG
CCCGAGTCGA TTTCAGTTTA TGTCAATATC ACAAGTTCCT GA
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| Protein sequence | MSYDHLLVQR PGVTFDETGE AHVLVWAPEA EKVQLKLDKT DHLLDLEKEG YGFWKLETRA
LAHGQQYSFL LDGEGPFPDP ATLHQPNGVH GASEAFDPQQ FRWTDDSWTN LPLKEYIIYE
LHAGTFTPEG TFAAMEAKLD HLVELGVNAI EIMPVSQFAG GRNWGYDGVF PYSVQDTYGG
PAALQRLVNA CHEKGIAVVL DMVYNHLGPE GNILGKFGPY FTDKYHTPWG DAVNFDDAWS
DGVRHYFVQN ALMWFRDFHI DGLRLDAVHA IKDFSPVHIL QEIREKTNAL GTGREHYLIV
EMDLNDTRYV KPTETGGYGM DAQWIDEFHH ALRVSSGQER SGYYSDFEGV ASLAKSFRDA
YVFDGIYSDH RKRKFGMKAD GIPGGQFIVF SQNHDHIGNR MLGERTSQLV SAEMQKLLAG
AVFVSPFVPL LFMGEEWAEP NPFQYFVSHT EKELADAVRK GRKAEFAAFH AEGEAPDPVA
ESTFENSRVQ WHLLQEEPHR TMLAYYRQWI ALRKSEQVLR ECDRNGLSVE VAEGKESIVI
QRVWERQHLV AFLNFSKAPQ EGLLPYEHLA WKKLIASSDP DWNGPREMPA QAGAGALSLP
PESISVYVNI TSS
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