| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0396 |
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| Symbol | |
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| ID | 8223962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 453170 |
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| End bp | 455350 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928273 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_003084830 |
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| Protein GI | 255034209 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.153348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.926984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TTGCCAATAA AAAACTTGTA GATCAATCCA AAGAAAATGA CCTGACCGTT
TACCCGGGAG AGCCGTACCC GCTCGGTGCG ACCTGGGATG GAAAAGGGGT GAATTTTGCG
CTTTATTCTG AGAACGCCAC AGGTGTGGAT CTGTGCCTGT TTGATAGCCC CGAAGCGACC
ACCGAGAGCG TCAAGATCGA GATCAGGGAA GTATCGCACC ACGTTTGGCA TGCCTATGTG
CCCGACCTGA AACCGGGACA GCTCTATGGA TACCGCGTGC ACGGACCTTA CGAACCGACT
GTGGGACTTC GATTTAACCC AAACAAGCTC CTCATTGATC CTTATGCAAA AGCGATTTCC
GGCACGATAC AATGGCACGA CGCGCTGTTT GGATATAACA TCGGCGACCC GGAAGAGGAC
CTCAGTTTCA GCGAGCTAGA TAGTGCGCCT TACATTCCCA AATCGGTCGT CGCAGATCAT
ATATTTGACT GGGAAGGCGT AACCGCGCCG GAGATCCCTT ATCACGACAC GATCATTTAT
GAGCTGCACG TGAAAGGCTT TACCTGCCTT CATCCCGACA TTCCTGAAGA AATACGCGGC
ACCTACGCCG GGCTAGCGCA TCCCGTGAGC ATTGCTTACC TCAAAAAGCT GGGCGTAAAT
GCCGTGGAAC TAATGCCGGT GCACCATTTC ATTTCCGACA GGCACCTCAA AGAACGCGGG
CTGACCAATT ACTGGGGGTA CAATTCCATC GGGTTTTTTG CGCCGGATGT GCGGTACAGC
AGCTCGGGCA CCTATGGCGA GCAGGTGAAG GAATTTAAAA ATATGGTCAA AGAGCTCCAT
AAGGCGGGAA TTGAGGTGAT ACTCGACGTG GTGTACAACC ACACCGGCGA GGGCAACCAT
ATGGGGCCGA CGCTGTCGTT CCGCGGAATT GACAATATGG CCTATTACCG GTTAATGGAC
GGTCGCTATT ATATGGATTA TACCGGCACC GGCAACACGT TGAATGCCAG GCTGCCAAGC
GTTCTGCGCC TGATCATGGA CAGTCTGCGA TACTGGATCA CCGAAATGCA CGTGGATGGC
TTCCGGTTCG ACCTCGCTTC TACACTCGCG CGCGAGCTGC ACGAAGTGGA TCGCCTGAGC
GCATTTTTCG ATATTATTCA CCAGGACCCC GTGATTTCGC AGGTGAAGCT CATCGCCGAG
CCATGGGACA TCGGTTTTGA CGGATATCAG GTGGGTAAAT TCCCCATTGG CTGGGCGGAA
TGGAATGGCC ATTACCGAGA TTGTATGCGG GATTACTGGC GCGGCGCGGA TAGTATGCTC
GCCGAATTCG CCGAGCGATT TACCGGCAGT TCCGATTTGT ACAAAGGCGA AGACCGGTTT
CCAACCGCCA GCATTAATTT CATCACCGCA CACGACGGTT TTACACTGAA CGACCTGGTG
TCGTATAATG ATAAGCGTAA CAATGAAAAC GGCGAGGATA ACCGCGACGG CGAGAGCCAC
AACCGCTCGT GGAATTGCGG AGAGGAGGGG CCGACGGAGA ACCAGGAAGT GATAGACCTG
CGCAACAAGC AGAAACGGAA TTTCCTTACA ACCCTCTTCC TGTCGCAGGG CGTGCCAATG
CTCGTAGCGG GTGATGAATG GGGCAGGACG CAGAACGGGA ATAATAACGC CTATTGCCAG
GACAACGAGA TCTCGTGGCT GAATTGGGAT AAAACGGATA AGCAAATGCT TTCATTTACC
CAAAAACTGA TCGCGTTCTG TAAGGCGCAT CCCACATTCC GCCGCAAACA CTGGTTCCGC
GGCATGCCGA TCAAGGGGAT CGGGCTGGAA GACATTGCCT GGTTTTTGCC CAACGGCGAG
GAAATGCCCG ACGAGAGCTG GAACCACGAC TTCGCCAAAT CGCTCGGAAT TTTTCTGAAT
GGCAAGGGTA TCAGGCACAT GGACCCGAAA GGCAAGCCCA TTTATGATGA TAGTTTTTAC
ATTATTTTCA ATGCCCATTA CGAGCCGGTG GAGTACACGC TCCCGCCCGT CAAGTACGGC
AACGAATGGC GCAAGGTCAT CGACACAGCC GTTGCCTGTG TGAGCGACGA CGGTCAGGTC
CTTAAACCGG GAGATAGTTT CTCGGTGGAA AGTCGCTCGG TAGTGGTATT CAGACATGCA
TTGGAGAAAC AAAAGATATG A
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| Protein sequence | MKKIANKKLV DQSKENDLTV YPGEPYPLGA TWDGKGVNFA LYSENATGVD LCLFDSPEAT
TESVKIEIRE VSHHVWHAYV PDLKPGQLYG YRVHGPYEPT VGLRFNPNKL LIDPYAKAIS
GTIQWHDALF GYNIGDPEED LSFSELDSAP YIPKSVVADH IFDWEGVTAP EIPYHDTIIY
ELHVKGFTCL HPDIPEEIRG TYAGLAHPVS IAYLKKLGVN AVELMPVHHF ISDRHLKERG
LTNYWGYNSI GFFAPDVRYS SSGTYGEQVK EFKNMVKELH KAGIEVILDV VYNHTGEGNH
MGPTLSFRGI DNMAYYRLMD GRYYMDYTGT GNTLNARLPS VLRLIMDSLR YWITEMHVDG
FRFDLASTLA RELHEVDRLS AFFDIIHQDP VISQVKLIAE PWDIGFDGYQ VGKFPIGWAE
WNGHYRDCMR DYWRGADSML AEFAERFTGS SDLYKGEDRF PTASINFITA HDGFTLNDLV
SYNDKRNNEN GEDNRDGESH NRSWNCGEEG PTENQEVIDL RNKQKRNFLT TLFLSQGVPM
LVAGDEWGRT QNGNNNAYCQ DNEISWLNWD KTDKQMLSFT QKLIAFCKAH PTFRRKHWFR
GMPIKGIGLE DIAWFLPNGE EMPDESWNHD FAKSLGIFLN GKGIRHMDPK GKPIYDDSFY
IIFNAHYEPV EYTLPPVKYG NEWRKVIDTA VACVSDDGQV LKPGDSFSVE SRSVVVFRHA
LEKQKI
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