| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0393 |
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| Symbol | |
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| ID | 8223959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 447315 |
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| End bp | 450917 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928270 |
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| Product | histidine kinase |
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| Protein accession | YP_003084827 |
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| Protein GI | 255034206 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.564913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG TTTCCAATTC GATCATCCAG CAGTTACAGA TCGTCTTTTC ATTTTCTATC
CTGCTCCTGT TTTTCAGCCT CCTGGCGTCG TATTACAGTA CGCAAAAGCT GATCAACAAC
TCTGAGCTGG TAAACCATAC CAATGAGGTA CTCATCGAGG CCGAGGCCAT TATTTCGCAC
ATGAAAGATG CGGAAACCGG CCAGCGTGGA TTCCTCATCA CCGCCGACCC GCAGTTTCTG
ACACCTTATG AGGGTGCCTA CGAGAAAACG ACCGACAGCT ACAACAACCT GCTCGAACTC
ACCGCCGATA ATCCGGTTCA GCAAAAGAAC CTGCGCGAGG TGAAAGCCCT GTACGAAGCC
AAGTTCGGAC AGATGCAGAA CATCATCGAC ATGGCTCGTA AAAACTCCAA TTTCGTGGAA
GACACCGAGT CGAGGCTGCG CGAGATGATC CGGGGCAAAA AGATCATGGA CGACCTCCGC
CTGTCCACCG ACCGCATCAA GGAAGAAGAA AGCAATGTGC TCAAAGAACG GCTTGAACAG
CAGCAGATTT ACATTAAATA CACTCCTATC CTGCTCGTAG CGGCGGCCCT GATCTCGATC
CTGATCACAA TCTCGTCCTA CCTGCGCATT CGCACGGACA TTGGCAAGCG ACTCGCCCAG
CAGCAGCTCG ACGAGGAAAA ATATACCGAA ACGCTGCGCC GCATCGGCCA TATCGAGCGC
GTTACCCAGC GGGTGTCGGA TGGCGATTAC TCTGCCAGAA GCACGGACGA AACCGACGAC
GAGCTCGGGC GCATTTCCAC GGCATTGAAT GCCATGGCCG GCTCGCTCGA ACAGACATTC
AGCGACCTCA GCATTCAGAA CTGGCTGCAA GCCGGTGAAG TGCAGGTCAA CGACGCCATC
CGCGGCGAGC GTGTCCTTAA AAAGCTGGCC AGCAACCTGA TCAACACGCT GGCGGCCTAT
TCGGGCGCGA ACCTCGGCAC GATCTACATT CTCGATTCGG ATTGGAAATT CAGTCTGGCG
GGCAGCTTCG CGGTACAGGA TGCGCCGCAA AGCGTGCTGG TGGGTCACGG CCTCGCGGGC
CAGGTGATTG TGGCAAAAAA ACCATTGCTT GTGCGTGATT TGCCCGATAA TTATCTCAAA
GTAAAATCCA GCCTCGGCGA AGCCAGTCCG GAAGCGCTGG CCATTTTGCC GCTTGTTTAC
TCCTATGAAT GCATTGGTGT GGTCGAGCTC GGGTTCCTGA AAGCACCGGA GGAACTGACG
ATGCGTTTCC TGGAAGAAAA CCTCGAAACG ATGGCGAGCG GTGTCAACTC GGCATTGGAT
TATGTGAAAC TGCAAAACTT CCTGGAAGAG ACGCAGGCGC AGGCCGAAGA ACTGCAAACA
CAGCACAACG AACTCGAAAA CCTGAATGCG GAACTCGAAG CGCAATCGCA GAAATTGCAG
GCGTCGGAAG AGGAGCTGCG GGTGCAGCAG GAGGAATTGC AGCAGACCAA CGGGGAGCTC
GAAGAGCGTA GCGGCCTGCT GGAAGAGAAG AATCTGGAAA TACTGAAAAA AGCGGAGGAA
CTGGAACTTA CTACGCGCTA TAAGTCTGAA TTCCTGGCAA ATATGTCGCA CGAATTGCGC
ACGCCGCTGA ATTCGATCCT GCTGCTGAGC AGGCTGCTGG CCGAAAATGA CGATAAGAAC
CTGACCTCCG AGCAGATCGA ATATGCAACG GTGATCCAGT CGTCCGGCAA TGGCCTGCTG
GGCCTGATCG ACGAAATCCT GGACCTTTCG AAGATCGAAG CGGGGAAAAT GGAGCTCGAT
TACGTGCCGG TGTCGGTAAA GGAAATCTGC GACGATATGA AGGGCCTTTT TGCGCCCGTC
GCCCGCGAAA AGGGGCTCGA CTTCTCGGTA GCGATCGGAA ACGGCGTGCC GCCGGTGATC
GAAACAGACA AGATGCGCAT GGAGCAGATC TTGAAAAACC TGGTTTCCAA TGCATTGAAA
TTCACCTCGC AGGGTTCGGT GGGCATTACC GTGAAATTGC AGGAAGGCAA CGACAGAATG
CTGTGCTTCG TCGTCCGCGA CACGGGCATA GGCGTGGCGC CGGAAAAGCA GCAGCACATT
TTTGAGGCAT TCCAGCAGGC CGACGGCTCC ACGAAGCGCA AATACGGTGG CACCGGCCTG
GGCTTGTCGA TCAGCCGCGA GCTGGCCAAG TTGCTGGGCG GGGAAATATC GCTCACGAGC
GTGGTGAACG AAGGCAGCGA GTTTACACTA TTTGTGCCAA TAAAGCCCAC CTATGTTGCT
GCGGAGCCTG AAACGGGTAA TCTTTTCGGC GTTCACCAGG AAGAACCGGC CAGCCAGGCC
GCTCCAAAAG TACAAAGCCG GTTTATCAGC ACGGTGATTC CCGAAAGCAT TCCCGACGAC
CGCGCATTGG TAACCGAGGC CGATAAAACG ATCCTGATCG TCGAAGACGA CACGTTTTTT
GCCAAATCAC TCCTCGACTA CACGCGGAAG CAGGGCTACA AAGGTATCGT GTCCGTGCGC
GGCGATGAAG GACTGGAACT TGCCAGGACG TTCAAGCCGA TGGGTATTTT GCTCGACATT
CAACTGCCCG TCCTGAGCGG CTGGGAAGTG ATGGACCAGC TCAAAAACGA CCCGGAAACG
CGGCATATTC CCGTTCACAT CATGTCGTCG CACCGGATGA AAAACGAGAG CCTTCAAAAA
GGAGCGATCG ACTTCATCGA CAAGCCGGTG GCGATCGAGA AAATGGACGA GATTTTCAGG
AAGATCGAAT ATGTGATCAG CAAAAAATCT AAAAAGGTGC TGATCGTGGA AGATAACTCC
ATGCATGCGA AGGCATTGGC CTACTTCCTG GGCACATTTG AGATCCATTC GGAACTGAAA
AGCGATATCC ATGAAGGCAT TCAGGCATTG TCCGGCAATG AGGTCGACTG TGTGATCCTC
GACATGGGTA TTCCCGACAA GAAAGCCTAC GATATGCTGG AAGAAGCCAA AAAGAACCCC
GGCTTCGAAC ACATTCCGAT CATTATCTTC ACCGGAAAAA GCCTCTCGAT GACCGAAGAG
CTGCGGATCA AGCAATATGC AGATTCGATC ATCGTCAAAA CGGCGCATTC TTACCAGCGC
ATGCTCGACG AGGTATCGCT CTTCCTGCAC GTGGTGGAAG AGAATAAGAA GAACGTTCGC
CAGAATACCG AAGCGCGTAA GCTGGGCGGC CTCGGTGAGA TATTGAACAA CAAAACAGTG
CTCATTGCCG ATGACGACGT GCGGAACATC TTCTCGCTTT CGAAATCATT GGAAAACTAT
AAAATGAACG TCCTGACGGC CCTTGATGGC AAGGAGGCCC TGCAAAAACT GCAAGAAAAC
CCCAGTGTGG ACGTGGTGCT GCTCGACATG ATGATGCCGC AAATGGACGG TTATGAAACC
GCCAAGCGCA TCCGTGAAAA CCCGCAATGG CGCAACCTTC CCGTGATCGC GGTAACAGCC
AAAGCAATGA CCGGCGACCG TGAGAAGTGT ATCAATGCGG GCGCTTCCGA TTACATTACC
AAGCCTGTGG ACATCGACCA GCTGATGTCG CTGCTGCGGG TGTGGCTTTA CGAAAAATAC
TGA
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| Protein sequence | MKKVSNSIIQ QLQIVFSFSI LLLFFSLLAS YYSTQKLINN SELVNHTNEV LIEAEAIISH
MKDAETGQRG FLITADPQFL TPYEGAYEKT TDSYNNLLEL TADNPVQQKN LREVKALYEA
KFGQMQNIID MARKNSNFVE DTESRLREMI RGKKIMDDLR LSTDRIKEEE SNVLKERLEQ
QQIYIKYTPI LLVAAALISI LITISSYLRI RTDIGKRLAQ QQLDEEKYTE TLRRIGHIER
VTQRVSDGDY SARSTDETDD ELGRISTALN AMAGSLEQTF SDLSIQNWLQ AGEVQVNDAI
RGERVLKKLA SNLINTLAAY SGANLGTIYI LDSDWKFSLA GSFAVQDAPQ SVLVGHGLAG
QVIVAKKPLL VRDLPDNYLK VKSSLGEASP EALAILPLVY SYECIGVVEL GFLKAPEELT
MRFLEENLET MASGVNSALD YVKLQNFLEE TQAQAEELQT QHNELENLNA ELEAQSQKLQ
ASEEELRVQQ EELQQTNGEL EERSGLLEEK NLEILKKAEE LELTTRYKSE FLANMSHELR
TPLNSILLLS RLLAENDDKN LTSEQIEYAT VIQSSGNGLL GLIDEILDLS KIEAGKMELD
YVPVSVKEIC DDMKGLFAPV AREKGLDFSV AIGNGVPPVI ETDKMRMEQI LKNLVSNALK
FTSQGSVGIT VKLQEGNDRM LCFVVRDTGI GVAPEKQQHI FEAFQQADGS TKRKYGGTGL
GLSISRELAK LLGGEISLTS VVNEGSEFTL FVPIKPTYVA AEPETGNLFG VHQEEPASQA
APKVQSRFIS TVIPESIPDD RALVTEADKT ILIVEDDTFF AKSLLDYTRK QGYKGIVSVR
GDEGLELART FKPMGILLDI QLPVLSGWEV MDQLKNDPET RHIPVHIMSS HRMKNESLQK
GAIDFIDKPV AIEKMDEIFR KIEYVISKKS KKVLIVEDNS MHAKALAYFL GTFEIHSELK
SDIHEGIQAL SGNEVDCVIL DMGIPDKKAY DMLEEAKKNP GFEHIPIIIF TGKSLSMTEE
LRIKQYADSI IVKTAHSYQR MLDEVSLFLH VVEENKKNVR QNTEARKLGG LGEILNNKTV
LIADDDVRNI FSLSKSLENY KMNVLTALDG KEALQKLQEN PSVDVVLLDM MMPQMDGYET
AKRIRENPQW RNLPVIAVTA KAMTGDREKC INAGASDYIT KPVDIDQLMS LLRVWLYEKY
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