Gene Dfer_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0392 
Symbol 
ID8223958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp446941 
End bp447306 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content52% 
IMG OID644928269 
Productresponse regulator receiver protein 
Protein accessionYP_003084826 
Protein GI255034205 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.284785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAGATCAT GATCGTCGAC GATGATTCCC GGAACATCTT CGCGCTTAAA 
GCCACCCTGA AAGCAAAGGG TTTCGAGTGC ATATCGTGCT CCGGGGCGCC GGAAGCGCTG
GATATCCTGC GGACGGACGT GCCGGTACAT GCCGTGCTCA TCGACATGAT GATGCCCGAA
ATGGACGGTT ACGAAGCCAT TCCTTTGATC AAAAACCTCG AAAGCAGGCA TTCTTTGCCC
GTAATCGCCG TTACCGCGCA GGCAATGGTG GGCGACCGCG AGAAATGCCT CGAAGCGGGA
GCCGACGATT ATATTTCCAA ACCGATCGAT GTCGACAAAC TATTGAGGAT ACTTAGCAAT
ATCTGA
 
Protein sequence
MEKKKIMIVD DDSRNIFALK ATLKAKGFEC ISCSGAPEAL DILRTDVPVH AVLIDMMMPE 
MDGYEAIPLI KNLESRHSLP VIAVTAQAMV GDREKCLEAG ADDYISKPID VDKLLRILSN
I