Gene Dfer_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0384 
Symbol 
ID8223950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp438090 
End bp440192 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content52% 
IMG OID644928261 
Producthypothetical protein 
Protein accessionYP_003084818 
Protein GI255034197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000171472 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.22141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGC CTTTGACTAC GCTGGCGCAA TGCCCGACCG ATCTCGTCTT TAACAATCAG 
GCCACATTGA ACAGTTTTGC CGCAGACAAC CCCGGCTGCG TGAATTTGAC GGGCGATCTG
ATCATTGAAG GCGCCGATAT TGTGGATTTA AAGCCTTTAA TTACGCTTAC CAGCGTAGGC
GGAGTGATTT CGATTCGAAA CAATCCCAAA TTGTTGGTTC TTGATGGCTT GGACAATATC
GCCACGGTGG ATTCCACTCT CGAGGTCTTA AATAATGTGT CGCTTTTGAG CCTGGAAGCT
TTTGAAGGCG TTACGACCGT GAAAGGTGAC CTGATCGTCG ACGGTAATGT TGCGCTCGAA
AGTGTCGGCG GGATCAGGCA TGTGGGTACA GTGGGTGGTT CGCTTGTAAT CGGTACCACT
AATTCGTTGC GAACGATGAG TGAACTTGTG GTTTGGTCCG TAGGTGGATC GGTCCGAATT
GGCTTTAATA GTGCTCTGAC GTCGCTGCAA GGCCTGGAAT ATATCACGCA AATCAACGGC
GATCTCGAAA TCACGAATAA TTACTCACTG ACGGATATGA CGGGCCTGAA CGGGTTAACG
TCCGTCGGCG GCGATGTTTT TTTTGATTTT AATGATAGCC TGGTCAATAT GCAGGGCCTC
AACTTGCTTA CCTCAGTGGG TGGCGAATTG TATATGGACG GCAATGTGAT GCTCGAAGAC
CTTTCCGGCC TCGAACAGCT TGCCTCGATA GGCGGCACGC TCACCGTCGC CGAACATGAC
TCGCTTACCA GTATTTCGGC TTTGAGTAAC CTGTCGTCGG TCGGTGGCGG AATGTATTTT
TTGCTCAATC CTTCCCTACA AACGCTCGGC GGCTTGCAGA ATGTGACGTC TTTGGGCCGG
GAATTGCTAA TCGCATTCAA TTTTCAACTT GAAAACCTGG ACGGACTTTC CCAATTGACG
TCGATAGGGG GCCTGGGCGC GCAGATTTCG CTCAATCCGC TACTTCAAAA TCTAGATGGA
CTGTCGTCGC TGACGACCAT CGACGGCGAT CTCGAAATCA CTTACAATCC TTCCTTAACG
AGTCTGGCAG GGCTAAGGAA CTTGCAAACG CTCGGTTCGG CAGCTACCCT CGCAGTGGCA
GCTAATGGCT CTCTCACCGA TTTGGAGGGA TTGAATGGCC TTACCACCGT CGATCGCCTT
TTTATCGAAG CAAATTTCAG CCTGAAAACA CTATCGGGCC TGGATAACCT CGTTTCGGTA
ACTGATTCCA TTTCAATATC TTACAATGAT AGTTTGACAA CCCTCAGCGG CCTGGCCGCA
TTGCAGACAA TCGGCGGCGG CCTGCTGATC ACCGAGGATT CGCTGCTGAC CAGCCTGGCA
GGGCTGAGCG GCCTCACAAG CATTGGCGGA GTGCTGACTA TCGCCAATAA TGCGGTGCTG
GAAACGTGTG CAACGGCGCA ATTCTGCGAA ATACTGAAAA CGAAACCTGT CGAGGCGGTA
TTCATCGCCG AAAACCTGGG AGATTGCGAA ACGCGCGAGC AGGTGGATCT GGCGTGTGTG
CAGCTGCCGG TAACCCTCGT GGCATTCACC GCCCGCGGGG AAGGCCGGAC GGTATTGCTC
GAATGGACGA CCAGTTCGGA ATCGAATAGT GATTTTTTTG AAATACAACA TGCCGATCAC
CGCGGCAAAA CCTGGGTAAC AGCAGGTAAA ATACAGGCGA CCGGGGAAAG CACGGACCTC
AACCGTTACA CTTTCACGCA TCCCGACCCG CGCCGGGCGG AAAACCTCTA CCGACTGAAA
ATGGTCGATC AAGACGGCAC CTACGCATTC AGCAGCATTC AGGCGGTGCG CTTCGACAAT
CTGCCGGAGT TTGAAATCTT CCCCAATCCT GTCGCGAGCA GTCTGATAAT CCGCTCATTG
AATGGGGATG CGCAACAGAT TGCCCTGTAC AACGCTGCCG GTAAGCGGGT TGCATTCAAA
CTGCTGAACA AGGAACTGTC CGCCGCGACG ATCGACACGA GCCATTTGCC GGCCGGGCTG
TACGTAGCCA AAGTCGCTTA TGCGGGCGGA GACGTGCATA CTGGCAGGTT TGTCAAGAAA
TAG
 
Protein sequence
MLLPLTTLAQ CPTDLVFNNQ ATLNSFAADN PGCVNLTGDL IIEGADIVDL KPLITLTSVG 
GVISIRNNPK LLVLDGLDNI ATVDSTLEVL NNVSLLSLEA FEGVTTVKGD LIVDGNVALE
SVGGIRHVGT VGGSLVIGTT NSLRTMSELV VWSVGGSVRI GFNSALTSLQ GLEYITQING
DLEITNNYSL TDMTGLNGLT SVGGDVFFDF NDSLVNMQGL NLLTSVGGEL YMDGNVMLED
LSGLEQLASI GGTLTVAEHD SLTSISALSN LSSVGGGMYF LLNPSLQTLG GLQNVTSLGR
ELLIAFNFQL ENLDGLSQLT SIGGLGAQIS LNPLLQNLDG LSSLTTIDGD LEITYNPSLT
SLAGLRNLQT LGSAATLAVA ANGSLTDLEG LNGLTTVDRL FIEANFSLKT LSGLDNLVSV
TDSISISYND SLTTLSGLAA LQTIGGGLLI TEDSLLTSLA GLSGLTSIGG VLTIANNAVL
ETCATAQFCE ILKTKPVEAV FIAENLGDCE TREQVDLACV QLPVTLVAFT ARGEGRTVLL
EWTTSSESNS DFFEIQHADH RGKTWVTAGK IQATGESTDL NRYTFTHPDP RRAENLYRLK
MVDQDGTYAF SSIQAVRFDN LPEFEIFPNP VASSLIIRSL NGDAQQIALY NAAGKRVAFK
LLNKELSAAT IDTSHLPAGL YVAKVAYAGG DVHTGRFVKK