Gene Dfer_0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0375 
Symbol 
ID8223941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp428448 
End bp430136 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content54% 
IMG OID644928252 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_003084809 
Protein GI255034188 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.633145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0212602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG AATTATTTGG CATTATCGCA TTGTTCGTCG GCACGGTCGC ATTGGCGGTT 
CCGTTCGGGA AGTACATTGC GAAAGTATAT GGAGGAGAAA AAACGCTCCT CGATCCCGTT
TTAGGCCCTC TTGAAAAAGG ATTTTACCGG TTGAGTGGCA TTCGCCCGAA TGTTGAAATG
AGCTGGAAAG AGCATTTGTT TGCATTGCTG ACGATCAACA TGGTCTGGTT TTTCCTCGGC
ATGCTGGTTC TGATGAACCA GGGATGGCTT CCGCTCAATC CCGACGGCAA CCCATCGCAG
TCCGCCGACC TGGCATTCAA TACCGCCATT TCGTTCGTCG TGAACTGTAA CCTGCAACAT
TACTCGGGCG AAACGGGCAT GAGCTATCTC GGGCAACTGT TCCTGATGTT CCTCCAATTC
GTTACCGCCG GCACCGGTAT GGCCGCCGCG GCGGTTGTGA TCATGGCCAT TAAAGAACGC
ACGACCGACA AGCTCGGCAA CTTCTACGAC CTGTTCGTCA AATCCTGCAC CCGCATCCTG
CTGCCGGTTT CGTTTGTGAT TGCACTAATC CTGCTATCAA ACGGCACGCC GATGACATTC
AACGGCAAGG ATACCATGGT TACCCTACAA GGCGATACCG TGCAGGTTTC CACCGGCCCG
GTCGCCGCAT TCGTGCCCAT TAAGCATGTA GGGACCAATG GCGGTGGATT TTTCGGTGCC
AACTCGGCCC ACCCGCTCGA AAACCCCAAC TACGCCACCA ATATGACCGA AATGTTCGGC
CAGATGATCA TCCCTTTGGC AATGATTTTC GCATTGGGCT ATTATGTTAA AAGAAAGCGG
CTGTCCTGGA TGATATTCAG CGTGATGACG CTCGGCTTTT TGCTCCTCAC CATTCCGACG
ATCGTCACCG AACTGCACGG CAACCCGAAA ATTGCGCAAA TGGGGATTGA TATGTCCTGC
GGCGCCATGG AAGGAAAGGA AACGCGGTTC GGGACCACGG CCTCCGCATT TTGGAGTATA
GCCACGACCG TTATCTCCAC GGGCTCCATC AATTCCATGC ACGACAGCTT CATGCCGGTG
TCGGGGCTTA CCCAAATGCT CTCCATGATG ACCAACGCAT TCTACGGAGG CGCGGGCGCG
GGTATCCTGA ACTTCTACAT ATTCATCATC CTCGCGGTGT TTATCAGCGG GTTAATGGTC
GGCCGCACGC CCGAATTCAT GGGCAAGAAA ATCGAAGCGC GCGAAATGAA GATCGCCATG
ATTGTGGCCT TGCTGCACCC GCTGCTGATC CTCGCCGCCA CTGGATTAGG CGTGTCGCTG
CCGGGGCTTA CGGCTGGTAC GCTCAATAAT CCCGGCTTTC ATGGGTTTAG CGAAATGCTT
TATGAATACA CCTCTTCGGC AGCCAATAAT GGCAGCGGTT TCGAGGGGCT GGGGGACAAT
ACGCCGTGGT GGAACATCAG CTGCGGGATC GTGCTGATCC TCTCGCGGTT CATTCCGATT
ATCGGCCCGG TAGCCATTGC GGGCATTCTG GCGGGCAAAA AGCATGTGCC GCAAAGTGCG
GGCACGCTCC AAACCGACAC CGGGACATTC GGCATCATGG TGTTTGCCGT GATCGTCATC
ATCACCGCAT TATCCTTTTT CCCAGCATTG ACCCTCGGGC CGATCGCCGA ATATTTTTCA
ATGCAATAA
 
Protein sequence
MNTELFGIIA LFVGTVALAV PFGKYIAKVY GGEKTLLDPV LGPLEKGFYR LSGIRPNVEM 
SWKEHLFALL TINMVWFFLG MLVLMNQGWL PLNPDGNPSQ SADLAFNTAI SFVVNCNLQH
YSGETGMSYL GQLFLMFLQF VTAGTGMAAA AVVIMAIKER TTDKLGNFYD LFVKSCTRIL
LPVSFVIALI LLSNGTPMTF NGKDTMVTLQ GDTVQVSTGP VAAFVPIKHV GTNGGGFFGA
NSAHPLENPN YATNMTEMFG QMIIPLAMIF ALGYYVKRKR LSWMIFSVMT LGFLLLTIPT
IVTELHGNPK IAQMGIDMSC GAMEGKETRF GTTASAFWSI ATTVISTGSI NSMHDSFMPV
SGLTQMLSMM TNAFYGGAGA GILNFYIFII LAVFISGLMV GRTPEFMGKK IEAREMKIAM
IVALLHPLLI LAATGLGVSL PGLTAGTLNN PGFHGFSEML YEYTSSAANN GSGFEGLGDN
TPWWNISCGI VLILSRFIPI IGPVAIAGIL AGKKHVPQSA GTLQTDTGTF GIMVFAVIVI
ITALSFFPAL TLGPIAEYFS MQ