| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0354 |
|---|
| Symbol | |
|---|
| ID | 8223920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 411306 |
|---|
| End bp | 412244 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644928231 |
|---|
| Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_003084788 |
|---|
| Protein GI | 255034167 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0723215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.320696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA GAATCAACGG CATCCACCAC ATTACAGCTA TTGCTGGTGA CGCGCAAACC
AACTACGATT TTTATACAAG GGTATTAGGC CTGAGAATGG TGAAAAAAAC CGTCAATTTC
GACGATCCCA ATACCTACCA CTTTTACTAT GGCGACGAAA ACGGTACGCC CGGCACGATC
CTGACTTTCT TCCCATGGGG TAACCAGATT CCCGCTGGCC GCCGCGGAAC ACGCCAGGCC
ACCGAAATCG GTTATTCCGT GCCCGAGGGT AGCCTCGATT TCTGGTTGAA AAGATTGGAG
GCCAACAAAG TGACCTATAA CAAACCCGCC GAGAAATTCG GGGAGCAATA CCTGACTTTC
CTCGATCCCG ACGGTTTGAA ATACGAACTG ACCGTGCCCA AAGTCGCCGA TAACCGCACG
CCATGGACGA CACCCGAAGT GACAGCCGAA TACGCAACCC GCGGTTTCCA TAATGTGACG
ATCACGACGA CCAACATCGC CGAAACCGCC AAAGTGCTGA CCGACATCTT CGGCTACCGC
CTCGTTGAAC AGCATGTAAA CCGCTTCCGT TTCGTGACGG ACGCCGTTGA CAATGCAAAT
ATCGTTGACC TGGTGGAAGC TCCCGGCGAA AGAGCGGGCC ATGTAGCGAA AGGATCGGTG
CACCACATTG CTTTCCGGGT GGCCAACGAC GACATTCTGA TGGAATTCCG CCAGAAAGTA
CTGGACGCCG GTTTGCAGAT CACCGATAAA ATCGACAGAA ACTACTTCTA CTCGCTCTAT
TTCCGCGAAC CAGGAGGCGT ACTGTTCGAA ATAGCCAGCG ACAACCCAGG CTTCGCAACC
GACGAAACCG TTGAGCAACT AGGCTCCGGC CTAATGCTCC CCCCACAATA CGAGCCCCGC
AGAGAGCAGA TTGTGAAGGT ATTGCCGGTG CTTGGTTGA
|
|---|
| Protein sequence | MENRINGIHH ITAIAGDAQT NYDFYTRVLG LRMVKKTVNF DDPNTYHFYY GDENGTPGTI
LTFFPWGNQI PAGRRGTRQA TEIGYSVPEG SLDFWLKRLE ANKVTYNKPA EKFGEQYLTF
LDPDGLKYEL TVPKVADNRT PWTTPEVTAE YATRGFHNVT ITTTNIAETA KVLTDIFGYR
LVEQHVNRFR FVTDAVDNAN IVDLVEAPGE RAGHVAKGSV HHIAFRVAND DILMEFRQKV
LDAGLQITDK IDRNYFYSLY FREPGGVLFE IASDNPGFAT DETVEQLGSG LMLPPQYEPR
REQIVKVLPV LG
|
|---|
| |