Gene Dfer_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0352 
Symbol 
ID8223918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp408575 
End bp410572 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content56% 
IMG OID644928229 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003084786 
Protein GI255034165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.259474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.181219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA ATCTATCACT ATTTAGTACC ATTTTTATTC TAACTGCTTC GCTAAATGTA 
TTCTCGCAGG TTGTAGTAAC ATTTCCAACA GAGCGTGCGG TATTCCAGCG TGACAACGCC
AACGAAGCCG ACGTATACAT TGGTGGGTAC GTCACGCAGG CCTATCAACG GATCGAGGCC
AGGCTCACGC CGCGCGTGGC CGGCGAGGGC ACACCATCCC CGGCAGACGG AAGCTGGGCC
ATTCTCGACA ATGAGATTTC CGCCGGGCAA TTCCTCGGTT CATTGCGCGT AAAAGGCGGC
TGGTATCAAC TCGAAGTGCG CGGCGTGAAC GCTGGCGGCA CATCGGCGGC GGCGTCCGTA
GCCCGTGTGG GCGTGGGCGA GGTGTTTGTG GTAGCGGGAC AGTCCAATGC CACCGGAGGC
GACTCGAACC CGAACGGCCC CGGCGCAGCA CACGACCAGG TAAACAGCGT CGATTTTCAG
AACGTCAATC CCGCAAATTC CACCATCACC CCTTACCCGG ATGTACAGCT CCCATGCCCG
GCATTTGTGC ATTTGGATGC ACAGACCAAA ATGGCGCCGT TCGGCAATTA TGCCTGGTGC
TGGGGATCGT TCGGTGACAA GATTTATGAG AAATTCCGCG TGCCCGTCAT GATTTTTAAT
GCCGGGTGGT CCAGCACCGG AATCAACAAC TGGAAACAAA CCACGGACCC GAACGGGATC
ACCACGAGCG CATTCGGCTA CACCTTTCCG ACCGGCCTTC CATTCGGACA TTTGCGGCTC
GCATTGAACA ATTACATCGC GCAGCTGGGC GTGCGGGCGG TTTTATGGCA TCAGGGCGAA
ACCGATAATT TGCTCGAACA GCCGGGCGAC GACACTTACA GCCGGTACTT GTCGGGATTG
TGGGATGTTG TGAATGCGAG CAGGAACCTA TCCGGAAAGC CTAACCTTGC CTGGGTAGTA
GCACGCGCGT CGCGGTTTAC GGTCAACAAT ATAAGCCGTG TTTCCACCAA TGTCGTGAAT
GCACAAAACG AGCTGATCAA CAACGACGGC CTTTATCCGC ACGTGTTCCA GGGCCCGGAA
ACAGATCCTT ATTACAGCAT CGAATACCGG CACGACGAGG TCCATTTCCG CGGCGACGGG
GTTACGCAAT CGCCGGATGG CCAGATCTAC TCCGGGCTCT TGCACCTCGC GGGCTTCTGG
TCGGATAAGA TAACGCCGGA ATTCCTGAGC CAATCGAACC CCTACGCGGC AACTCCGCCA
CCGGCCGTTG CTGCCGTGTA TGTTCCCGGC GGCACGCAAG TCACCTTCAC CGGACCGTCT
GTCCCGGGCG GACACCAGTA CAATTGGCTT ATGGGCGACA ACTGCAACCA GGTCCAGCAC
ACCTCGCAGC AGTGGACCGT AGGCGCGGGA TTGTACAAGC TCAAAGTCAT CGACCCCAAC
CGGAATGCGG TTTTCTCGCC CACTTTATTT GTATCAGGTA GCGCATTGCC CGTCACCTGG
CAGTCGTTCA CGGCCCGCGT GGGCGACCAC GGGCGTGTGG TACTCAACTG GTCGACCGCA
TCGGAACTGA ATGCATCCCA TTTCGAAGTC CAGCGAAGTA CCGATTCCCG CACATTTGCT
ACCGTTAAAG CCGTGAATGC CGCCGGCAAC TCACGGGCCA GTTCGTATTA CGAGTATGAA
GATGAATATC TGCCGAAAGG CACCTACTAT TACCGCCTGC GGCAAATCGA CGCGGACGGC
CAATCGGACC TGACCCGCAT CGTGAGCGTT CGCATCGATG GCAACGAGGC CGTGCGCATT
TACCCCAATC CGGCAACGGA CGTCATCACG ATAGAGTCTG CCGGAGCGTT GAACCGCATT
GACATTTACA CTAGCACAGG CCGGCTGATC CGCAGGAGCC AGACGTTGGA AAAATCAATG
CAAGTCAACA TCGCCGACCT TCCCACAGGT CTGTATGTGG TGAATGTGGA CGGGCGCGAG
TTTAAAATTG TAAAATAG
 
Protein sequence
MKRNLSLFST IFILTASLNV FSQVVVTFPT ERAVFQRDNA NEADVYIGGY VTQAYQRIEA 
RLTPRVAGEG TPSPADGSWA ILDNEISAGQ FLGSLRVKGG WYQLEVRGVN AGGTSAAASV
ARVGVGEVFV VAGQSNATGG DSNPNGPGAA HDQVNSVDFQ NVNPANSTIT PYPDVQLPCP
AFVHLDAQTK MAPFGNYAWC WGSFGDKIYE KFRVPVMIFN AGWSSTGINN WKQTTDPNGI
TTSAFGYTFP TGLPFGHLRL ALNNYIAQLG VRAVLWHQGE TDNLLEQPGD DTYSRYLSGL
WDVVNASRNL SGKPNLAWVV ARASRFTVNN ISRVSTNVVN AQNELINNDG LYPHVFQGPE
TDPYYSIEYR HDEVHFRGDG VTQSPDGQIY SGLLHLAGFW SDKITPEFLS QSNPYAATPP
PAVAAVYVPG GTQVTFTGPS VPGGHQYNWL MGDNCNQVQH TSQQWTVGAG LYKLKVIDPN
RNAVFSPTLF VSGSALPVTW QSFTARVGDH GRVVLNWSTA SELNASHFEV QRSTDSRTFA
TVKAVNAAGN SRASSYYEYE DEYLPKGTYY YRLRQIDADG QSDLTRIVSV RIDGNEAVRI
YPNPATDVIT IESAGALNRI DIYTSTGRLI RRSQTLEKSM QVNIADLPTG LYVVNVDGRE
FKIVK