Gene Dfer_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0332 
Symbol 
ID8223898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp381659 
End bp383170 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content59% 
IMG OID644928210 
Productprotein of unknown function DUF1501 
Protein accessionYP_003084767 
Protein GI255034146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00191345 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCACC ATCACGAAGA CGAATTCCGC CTGCATACGC CCGAATTCAA CGAACTGCAC 
CGGAAACTCG ACCGCCGCCG CTTTCTTACC CAGACATCCC TCGGGCTGGG CGCGATGGCC
GTCGGCTCGC TTTTCGGGCT GGATAAGCTA TACGGATCGG CCACGCGGCA AGCCGCCACC
GCCTCGGACC TCGAAGCCGA TATCCTGAAA GCATTGCCGC ATATCGCGCC CAAGGCCAAG
CGCGTGGTGT ATTTGTTTAT GGCAGGCGGG CCTTCGCAGT TCGAAACGTT CGACTACAAG
CCCGGATTGA TCAAAATGGC AGGGCAAAAC CTGCCCGATT CGGTGCGGAA AGGTCAGCGG
CTCACGGGCA TGAGCGCGAG CCAGAGCGCG CTGCCTATGG CCCCGTCGAT TTACGGTTTC
AACCAGCACG GCAAAACCAA CACCTGGGTG AGCGAGCTGC TGCCGTACAC CGCCAAAGTG
GTGGACGACC TCTGCATTGT CAAATCCATT TATTCGGAAG CCATTAACCA CGACCCTGCC
ATTACCTTTT TCCAAACCGG CAACCAGCTT CCGGGCAGGC CGTCCATCGG ATCATGGGTA
AGCTACGGGC TCGGGACCGA CAACAACAAC CTGCCCACAT TCATTGTATT GGTTTCAAAA
AATGCCCCCA AAGACCAGCC GCTCTATGCC CGGCTTTGGG GAAACGGCTT TCTCGAATCA
CGGCACCAGG GCGTGCAGTT CCGTTCGGGC AAAGACCCGG TGCTGTTCCT GAACAATCCG
GAAGGCTACG ACGGCCACGA CCGGAAGGAA ATGCTGGACT ATCTTTCGAA ACTCAACCAG
CTGCAAAACG ACGCTTACGG CGACCCGGAG ATCAACAACC GCATTGCACA ATACGAAATG
GCCTTCCGCA TGCAAACCTC CGTGCCCGAA GTAATGGACA CCGCCGCGGA ACCCGACGAA
GTTTTCGAAC TCTACGGCCC CGATAGCCGC GACCCGGGCA CCTATGCGGC CAACTGCCTG
CTGGCGCGCA AACTGCTCGA AAAAGACGTC AAGTTTGTGC AGCTCTACCA CCAGGGCTGG
GACCAGCACG GCGGGCTGCC CAAGGCTATC GCGCAGCAAT GCAAGGCCAC CGACCAGGCC
ACCGGCGCGC TCATTATGGA CCTGAAACGC CGCGGGTTGC TGGACGATAC CCTGGTGATT
TGGGGCGGGG AATTCGGCCG GACGGTGTAT TCGCAAGGCA AGCTCAGCGC TACCGACTAC
GGCCGCGACC ACCATCCGCG GTGCTTCACG ATGTGGATGG CCGGCGCGGG CGTCAAATCG
GGATTCAGTT TTGGCGAAAC CGACGATTTC AGCTACAATA TCGTGAAAGA CCCGGTGCAC
GTCCACGACT TCCACGCTAC GCTGCTGCAT TTGATGGGTG TGGACCACGA GCGGCTCACC
TACAAGTTTC AGGGCAGGCG TTTCCGTCTC ACAGACGTGC ATGGAAAGCT GGTGAAAGAC
ATTCTGGCGT GA
 
Protein sequence
MQHHHEDEFR LHTPEFNELH RKLDRRRFLT QTSLGLGAMA VGSLFGLDKL YGSATRQAAT 
ASDLEADILK ALPHIAPKAK RVVYLFMAGG PSQFETFDYK PGLIKMAGQN LPDSVRKGQR
LTGMSASQSA LPMAPSIYGF NQHGKTNTWV SELLPYTAKV VDDLCIVKSI YSEAINHDPA
ITFFQTGNQL PGRPSIGSWV SYGLGTDNNN LPTFIVLVSK NAPKDQPLYA RLWGNGFLES
RHQGVQFRSG KDPVLFLNNP EGYDGHDRKE MLDYLSKLNQ LQNDAYGDPE INNRIAQYEM
AFRMQTSVPE VMDTAAEPDE VFELYGPDSR DPGTYAANCL LARKLLEKDV KFVQLYHQGW
DQHGGLPKAI AQQCKATDQA TGALIMDLKR RGLLDDTLVI WGGEFGRTVY SQGKLSATDY
GRDHHPRCFT MWMAGAGVKS GFSFGETDDF SYNIVKDPVH VHDFHATLLH LMGVDHERLT
YKFQGRRFRL TDVHGKLVKD ILA