| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0330 |
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| Symbol | |
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| ID | 8223896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 378442 |
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| End bp | 380154 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928208 |
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| Product | oxidoreductase |
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| Protein accession | YP_003084765 |
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| Protein GI | 255034144 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0122567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATT TCAACATAGA CGCCATAAAG GCACAAACAT TTGACGCGAT CGTTGTCGGG
ACGGGGATCA GCGGCGGGTG GGCGGCCAAA GAACTTACCG AAAAAGGCCT CAAAACGCTC
GTTCTCGAAC GGGGACGCGA TGTGAAGCAT CTCGTCGACT ACCCTACCAC TAACATGATG
CCCTGGGAAT TTGAGCACCG CGGCCTGCCT CCGCTGGCGG CCCGGGAGGC GAGTCCGATG
GCAAGCAAGC ATTACATTTT CCGCGAAGAT GCCATGCATT TCGTCGTGAA GGACTACGAG
CATCCCTATG TGCAGGACCA GCCGTTCAGC TGGATGCGCG GTTACCAGGT AGGCGGCCGC
TCGCTGCTAT GGGCGCGGCA AACGCAGCGA TGGTCGGAAT ACGATTTCGA CGGCCCGGCG
CGCGACGGCT TCGCCACCGA CTGGCCCATC CGCTACAAGG ACATCGCGCC GTGGTACAGC
TACGTAGAGA AGTTTGCGGG CATTTCGGGC AACAAGGACG GCCTGCCGCA GCTTCCCGAC
GGCGAGTTTT TGCCGCCGCA CGAAATGAGC TGCGTGGAAA AGCATTTCAG CGACCAAACG
GCCAAGAACT ACAAGGGAAC GCGCCCGGTT ATCATCGGTC GGGCTGCGCA TATTACCGAT
CCGCAACCGA TCCACACGCA GCAGGGCCGC GCCAAATGCC AGCACCGCAA CATGTGTCAG
CGCGGCTGTC CGTTCGGCGG GTATTTCAGT ACCAACGCTG CAACATTGCC GTGGGCCGAA
AAAACGGGTA ATCTCACGTT AAGACCACAT TCAGTGGTGC ATTCGGTGAT TTACGATGAG
CAAAAGAAAC GCGCGACCGG CGTGCGCGTG GTAGATGCGC AAACGAAGCA GATGACCGAG
TTTTATGCCA AAATCATCTT CATTAACGCA TCAGCTATCA ACTCTAACCT GATTTTACTT
AATTCCAAAT CGCACCGCTT CCCCAATGGC CTGGGAAACG ACAGTGGAAC GCTCGGCAAA
TTCATCGGCT TCCACAACTA CCGCGGCCGC GTAACCGCAG ATTTTGACGG TTACCACGAC
CGCACGACCG ACGGACGCCG ACCGAACGGT GCCTATATCC CCCGTTTTCG CAACGTTTTC
AAGCAGGAAA CCGACTTTCT GCGCGGCTAT GCAACTTCGT TTTCAGCTTC CAAATCCGGA
AACGCCAATG AAGGCCTCGG CGAATCGCTG AAAGCCAGCC TCTTTGCCCC CGACACCAGC
GGCTGGTCGA TCGGCGCGCA AATGATGGGT GAAGTGTTAA TGAAAGAAAC CAATTTCGTA
GCGCTGCACG ATAGCCTGAA AGATGATTGG GGCATTCCGC AGCTCCGAAT GAACGTATCG
TTCGACGACA ACGACATGAA GATGGTGAAG GACTTTTACA CCGAGCTCAG CGAAATGCTC
GACAAAGCCG GATTTAAAAA CATCAAAACC GCCGACACCC TGCGCAACCC CGGCAGCGAA
AACCACGAAA TGGGCGGCGC CAGAATGGGC AAAGACGCCA AAACATCGGT ACTCAACAAG
TGGAATCAAA TGCACGACGT CCCGAATGTT TTCGTCACCG ACGGCGCCTG CATGACCTCC
ACCGCAACAC AAAACCCATC GCTCACCTAC ATGGCGCTCA CGGCGAGGGC AGCGGATTAT
GCGGTTGGCG AGATGCGGAG GGGGAACATA TAG
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| Protein sequence | MSYFNIDAIK AQTFDAIVVG TGISGGWAAK ELTEKGLKTL VLERGRDVKH LVDYPTTNMM
PWEFEHRGLP PLAAREASPM ASKHYIFRED AMHFVVKDYE HPYVQDQPFS WMRGYQVGGR
SLLWARQTQR WSEYDFDGPA RDGFATDWPI RYKDIAPWYS YVEKFAGISG NKDGLPQLPD
GEFLPPHEMS CVEKHFSDQT AKNYKGTRPV IIGRAAHITD PQPIHTQQGR AKCQHRNMCQ
RGCPFGGYFS TNAATLPWAE KTGNLTLRPH SVVHSVIYDE QKKRATGVRV VDAQTKQMTE
FYAKIIFINA SAINSNLILL NSKSHRFPNG LGNDSGTLGK FIGFHNYRGR VTADFDGYHD
RTTDGRRPNG AYIPRFRNVF KQETDFLRGY ATSFSASKSG NANEGLGESL KASLFAPDTS
GWSIGAQMMG EVLMKETNFV ALHDSLKDDW GIPQLRMNVS FDDNDMKMVK DFYTELSEML
DKAGFKNIKT ADTLRNPGSE NHEMGGARMG KDAKTSVLNK WNQMHDVPNV FVTDGACMTS
TATQNPSLTY MALTARAADY AVGEMRRGNI
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