Gene Dfer_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0328 
Symbol 
ID8223894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp377459 
End bp378136 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID644928206 
Productprotein of unknown function DUF500 
Protein accessionYP_003084763 
Protein GI255034142 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00857832 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCCTCA ACAAATTGAA ATCCATGAAA ATGCAAGCCC TCCTGCTCGT AGGACTAGCC 
ATTTCGGCGC CGTCATTCGC GCAGAACAAA GAAGAAGATA AGATCAAAGC CGCTACGGCG
GTACTGAGCG ATTTCAACGG AATGCAAATC CCTGCCCCGC TGCTCGAAGC CTCGAAAGGC
ATTATCATCA TCCCGCGAAT GATCAATGGC GGCCTGATCG TCGGCGGCAA GCACGGCAAA
GGGCTCGCGA TGATCAAGCG AGAGGATGGC AAATGGAGCG ATCCCGTGTT TGTTACCCTC
ACGGGCGGCA GTGTAGGCGC GCAAATCGGC GTGCAGGCAG TGGATCTGGT GTTGATATTT
AAAAGCGATA AGACGCTTAT GAATATCGAA AAGGGCGATT ACACGCTAGG CGGCGACGTG
TCCGTTGCTG CCGGGCCGGT GAGCAAGAAC GCCTCCGCCA CCACCGACTA CAAACTCGAA
GCCGAGGTAT ATTCGTATTC CCGCGCCAAG GGACTTTTCG CAGGTGTAAC CGTGAACGGC
GCCATGCTGG ACGTGGACGT ACGCGCCAAC ACCGGACTTT ACGGCAGCAA ATCCACCGTT
AAATCCATCT TCACAGAGTC CAATATCTCA TCCGAGGCCG TAGACAACCT GCGCGAAGCA
CTGGATGACT TCAACTGA
 
Protein sequence
MFLNKLKSMK MQALLLVGLA ISAPSFAQNK EEDKIKAATA VLSDFNGMQI PAPLLEASKG 
IIIIPRMING GLIVGGKHGK GLAMIKREDG KWSDPVFVTL TGGSVGAQIG VQAVDLVLIF
KSDKTLMNIE KGDYTLGGDV SVAAGPVSKN ASATTDYKLE AEVYSYSRAK GLFAGVTVNG
AMLDVDVRAN TGLYGSKSTV KSIFTESNIS SEAVDNLREA LDDFN