| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0324 |
|---|
| Symbol | |
|---|
| ID | 8223890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 372663 |
|---|
| End bp | 373604 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644928202 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_003084759 |
|---|
| Protein GI | 255034138 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0297927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.111016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAT TGTTTCAGAT AAATAGGAGG GATTTCCTCA AAAAAAGTGG GTTGGTGGCC
GCAGCGTGCG GTTTTGCGCC GCTATCCGCC TTCGCCCGGC GCGATTCAGT AGTACAGCTT
ACAATTCTCC ATACCAACGA CGTACACAGC CGCATCGATC CGTTTCCGAT GGACGGCTCG
CGCAACCAGG GCCTCGGAGG CGTGGCGCGC AGGGCCGCAT TGGTAAAGCA AATCCGCGCC
GAGCAGCCCA ATGTGCTTTT ACTTGATGCC GGAGATATTT TCCAGGGCAC GCCTTACTTC
AATTTGTACG GCGGCGAGCT GGAATTCTCG ATCATGAGCC AAATGGGCTA CGACGCTGCC
ACCATGGGCA ACCACGACTT CGACAATAGC ATCGCCGGCT TCGTGAAGCA ACTCCCGCAC
GCCAATTTCC CGTTCCTGGT GAGTAACTAT GATTTCAGCA ACACCGAACT GAAGGGGAGG
ACGCAGCCTT ACAAGATATT CAAAAAACAA GGTCTGAAAA TCGGCGTTTT CGGGGTTTGT
ATTGAATTGG AAGGGTTGGT GAACAAAAAG AATTACCTGG AAACAGTATA CCTCGATCCC
ATTGCCAAAG CGAACGAAAT GGCGGCGCTG CTCAAAAATG AGCACCATTG CGACCTGGTG
ATCTGCCTGT CGCACCTAGG CTACAAATAC AAGGAAAACA AAGTCTCCGA CCAGGTACTC
GCCAAATCCA CCCGCAACAT CGACCTGATC ATCGGCGGCC ACACGCACAC ATTTATGAAA
GAACCCGAAC ACATCCCAAA CCTCGACGGC AAAATCACGA CCATCAACCA AGTAGGTTTC
GCCGGCATTA ACCTCGGCCG CCTGGACTAC TTCTTCGACC GCGACCGCGG GGAGAGGAAG
ATGGTATCGG CGGTGTTGCC GGTACGAGAA AACCTGGCTT AG
|
|---|
| Protein sequence | MEELFQINRR DFLKKSGLVA AACGFAPLSA FARRDSVVQL TILHTNDVHS RIDPFPMDGS
RNQGLGGVAR RAALVKQIRA EQPNVLLLDA GDIFQGTPYF NLYGGELEFS IMSQMGYDAA
TMGNHDFDNS IAGFVKQLPH ANFPFLVSNY DFSNTELKGR TQPYKIFKKQ GLKIGVFGVC
IELEGLVNKK NYLETVYLDP IAKANEMAAL LKNEHHCDLV ICLSHLGYKY KENKVSDQVL
AKSTRNIDLI IGGHTHTFMK EPEHIPNLDG KITTINQVGF AGINLGRLDY FFDRDRGERK
MVSAVLPVRE NLA
|
|---|
| |