| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0312 |
|---|
| Symbol | |
|---|
| ID | 8223878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 354102 |
|---|
| End bp | 356057 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644928190 |
|---|
| Product | protein of unknown function DUF303 acetylesterase putative |
|---|
| Protein accession | YP_003084747 |
|---|
| Protein GI | 255034126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.737711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA TCCTGTTACT GCTGCTCCTC GCGTGCACTT CTTCCGCATT TGCGCAAGTC
AAATTCGCCC GGCTGTTCTC CGACCATGTC GTGCTGCAAC GCCAAAAACC GATTCCCGTG
TGGGGATGGG GCAAACCCAG TGAAAAAGTG AAAGTAACCC TGGCAGGGCA AACGGTGGAG
GCAAAAGCCG ATCCCACAGG CAAATGGCAG GTGAGTTTCA AGGCACTGGA AGCGGGCGGA
CCGCATACTT TGCAGGCAGC CGCCAAATCG GGCAATGCTG CCGTGAACGA CGTGCTGATC
GGCGAAGTGT GGCTTTGCTC CGGGCAGTCG AACATGGAAT GGCCGGTATC GGCAGCTAAA
AATTACGAGG AAGAGCGGAA AAATGCCGAT TTCCCGCAAA TCCGCCACTT CCGCGTCGAC
CACCTGGTGA CGCTCCAACC CGAGCAGGAC CTGAAAGCCG GAGAATGGAA GATCGCCAAT
GCCGAAACGG TGGGCGGATT CACGGCGGTA GGCTTCTTTT TTGCCCGCGA AATTCACCAA
AAACTGAATG TGCCGATCGG CATCCTGCAT TCGTCGTGGG GCGGCTCGCA AATCGAAGGC
TGGATCAGCA AGGAAGCAAT GCTGGGCAAC GACGAGCTCC GCAGTTACGC ACAGAATTTG
CCCAAAACAT GGGAGGAAGC GGACGCGGTA ATGGACAAAA AACTCAAAAA GCAGCTTTTC
AAAAACGCCT CGTACGACCC CACGCGTGAG GACGAACAGA AATATATTGC CCCGGATGTG
GATTTGACCA CCTGGCAAAA AACCGCCGAC GGCGTCGGCC AATGGGATTG GAAAGGTCTG
ATGGGCTTCC GCGGCAGAGG TTACATGGCA AAAGAAGTGA CCATACCCGC AGACTGGGTA
TCAAAGCAGA CGACGCTTTC GCTCGCTGAG AACGACGGGC CCGTTGAGGT GTATATCAAT
GGCAAACCCG TGCACGAAGG CGCTGCCAAA GGCCCCCGCA AGATCCAGCT GCCCGCCAAC
ACGTGGAAGG ACGGCAGGAA TATCATCACC ATTAAAACCG GCAATATGGT AAGCGCAGCG
TGGTTCGGGC CGGGACTGAT GGGCTCCGCC GGCGAGTTGT ATGTGGAAGA AAGCAACCGC
AAAATCAGCA TTGCCAAAGA TTGGTACCTC ATGCCGGCTT TCGCCGAAAA GCACGAGTAT
GCGCATTTGA TGAACAATGT AGGCACCACG ATTTACAACG CGATGATCGT CCCGCTGCTG
CCGTTCGGCA TTCGCGGAAC GCTGTGGTAT CAGGGCGAGA GCAACGCGGG CCGTGCCTAC
CAGTACCGGC AGTCGTTCCC GCTCATGATC AACGACTGGC GCAAGCTTTG GAACGACGAC
TTCTCGTTCT ACTGGGTGCA GCTATCCAGC TTCGGAACCG ATCGCGATAG TAACAAGGGC
AGCAACTGGG CCGAGCTGCG CGAAGCGCAA AACCTCACAT TAAGCCTCCC TAAAACAGGC
ATGGCCGTTA CCACCGACGT AGGTAACCCG AACGACATTC ACCCGACCAA CAAACAGGAC
GTGGCGCATC GCCTCGCTAC CCAGGCGTTG AAAAACGATT ACGGCCAGAA CATGCCTTAC
GCCTCCCCGA TGTACGAAGG AATGCAGGTT GACGGCAGCA AGGCCATTAT TTCATTCAAA
AACGCAGAAA ACGGGTTGAC GATCAAAGAC CGCTACGGCT ACCTCAAAGG GTTCGAGATT
GCCGGCGACG ATAAAGTATT TCACTATGCC AAAGGGGAAA TCCAGGGCAA CAAGGTCGTC
ATTTCAAGCC CCAACGTGAG CAAACCGGCT GCGGTGCGTT ACGGCTGGTC CGATGCGCCC
GAAGATGCGA ACCTGTTCAG TACCGACGGT TTCCCGGCAA GCCCGTTCAG GACCGACTCC
TGGCCTGGCA TCACCGTGAA CGCCCGTTTC GAATAA
|
|---|
| Protein sequence | MKRILLLLLL ACTSSAFAQV KFARLFSDHV VLQRQKPIPV WGWGKPSEKV KVTLAGQTVE
AKADPTGKWQ VSFKALEAGG PHTLQAAAKS GNAAVNDVLI GEVWLCSGQS NMEWPVSAAK
NYEEERKNAD FPQIRHFRVD HLVTLQPEQD LKAGEWKIAN AETVGGFTAV GFFFAREIHQ
KLNVPIGILH SSWGGSQIEG WISKEAMLGN DELRSYAQNL PKTWEEADAV MDKKLKKQLF
KNASYDPTRE DEQKYIAPDV DLTTWQKTAD GVGQWDWKGL MGFRGRGYMA KEVTIPADWV
SKQTTLSLAE NDGPVEVYIN GKPVHEGAAK GPRKIQLPAN TWKDGRNIIT IKTGNMVSAA
WFGPGLMGSA GELYVEESNR KISIAKDWYL MPAFAEKHEY AHLMNNVGTT IYNAMIVPLL
PFGIRGTLWY QGESNAGRAY QYRQSFPLMI NDWRKLWNDD FSFYWVQLSS FGTDRDSNKG
SNWAELREAQ NLTLSLPKTG MAVTTDVGNP NDIHPTNKQD VAHRLATQAL KNDYGQNMPY
ASPMYEGMQV DGSKAIISFK NAENGLTIKD RYGYLKGFEI AGDDKVFHYA KGEIQGNKVV
ISSPNVSKPA AVRYGWSDAP EDANLFSTDG FPASPFRTDS WPGITVNARF E
|
|---|
| |