Gene Dfer_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0308 
Symbol 
ID8223874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp349575 
End bp350198 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID644928186 
ProductGDSL family lipase 
Protein accessionYP_003084743 
Protein GI255034122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.449597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.278541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTGGT ACGAAGACGA AGTACAAAGA GTCGAAAAAG AACGATCAAC ACTAAAGTAT 
GAGCCGGAAA CGGTTTTTTA CGGAAGTTCG AGTTTTACGC TGTGGCCCGG CATGTACCAG
GATTTTGCGG AATTGAAGCC GATCAACCTG GGCTTTGGGG GTTCCACGCT TGCGGCCTGC
GTCTGGTTTT TCGAGCGTAT TATGACCACC GTTACCACGC CGCAGCGCTT CGTCGTCTAT
GCCGGCGACA ATGACCTGGG CGACGGGCGG CATCCTACGG AAGTGTTGCT CTTCTACCGG
CAGCTGATAC GGCTCGTACG TGACCGTTTC GGTGCGATTC CCTGCTTTTT CGTATCCATC
AAGCCAAGTA TACAGCGGTG GGAAATCATT GATTCCATCC GCACGGCCAA TGAACTGATC
CGCGAGGAAA CCGGGAAAGA CACGCAGCAG CATTACATTG ATATTTTCCC GCATATGGTC
AACTACCAGG GCTACCCGCG CAAATCGCTT TTCGAGGCGG ACGGGCTGCA CCTGAGTGGG
GATGGCTATG CGATTTGGAA GAAATTGATC AGTGAGCATA TACATGCCGC CGCCGGGGCG
GATACACTTC ATCAAACTCC TTAA
 
Protein sequence
MVWYEDEVQR VEKERSTLKY EPETVFYGSS SFTLWPGMYQ DFAELKPINL GFGGSTLAAC 
VWFFERIMTT VTTPQRFVVY AGDNDLGDGR HPTEVLLFYR QLIRLVRDRF GAIPCFFVSI
KPSIQRWEII DSIRTANELI REETGKDTQQ HYIDIFPHMV NYQGYPRKSL FEADGLHLSG
DGYAIWKKLI SEHIHAAAGA DTLHQTP