| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0294 |
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| Symbol | |
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| ID | 8223860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 331637 |
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| End bp | 334036 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928172 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003084729 |
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| Protein GI | 255034108 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.190357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CCCTTAATGC GCGTAAGGAC GATCTGCTGC TGGCGATCGA GCGGTTTAAA
CTTGTGGCAA AAGCTACCCA TGACGTAATC TGGGATTGGG ACCTGGAAAG GGGCACCTTG
TGGTGGAATG AGGGTATGCA GGAAATTTTC GGGTACCGCC CCGAAGAAGT CGAAGGCGGG
CCCAACTCGT GGTTTGACCG TATCCATCCC GACGACCAGG ATGAGGTTAT CAAAAAAATC
TACGAGGTAA TCAACCAGGG AGAGAGCAAC TGGTCGGATT TTTACCGGTT CCGACGTGCC
GACGGCTCGT ACGCGCACGT GCACGACCGC GGCTACACGA TCCAGATCAA CGGAAAGCCG
GTGCGGATGG TCGGTTCGAT GATGGACATT TCCCGGCAGC TGCGGTCCGA CAGAGCCCGG
GAAGAGAGTG AAGAAAGCCT AAAATTCGCC ATCCAGGCCG CCCAGCTCGG CACCTGGAAC
CTCAATCCGA TCGACCGGAC GGCGCTTTTC AACGACCGCT GCAAGGAGCT CTACGGCTAC
CCGGCCGAGG CGGACATGTA TTACGAGCGC CTGGTGCAAT TTGTGCACCC CGCCGACCGC
AGCCGGGTGA TCGACGCGAT CGAGCGGGCG CTAGACCCTT TGCAGCGCAC GCCCTACGAT
GTGCGATACC GGGTTAACGG CGCCACAGAC CGCAAACTTC GCTGGCTGCA TTGCACCGGC
CAGGCGTATT TCGATCAGGA AGGTACGCCG TACCGGTTTT CAGGCATTTC GCGTGAAATA
ACTTCCGAAG TCACCAGCCA GGAAAAAATC GCCTGGGCCG ACCAGCAGGC CGCGATGACT
ATTGAAGGAT CGGGCGCCGG TTCATTTATG GTTACGCTGG CCACGAACGA GATCATTTAC
TCGCCTACTA TGGCGCATAT CATCACCGGC AGCGAAAATG CGAACATGAC GCGCGAACTG
CTGCTGGAAA GCCTCCACCC GGAAGATGTA GGTATCCGGA ACAATGCGTA TGCCGAGGCC
GAAGCGAGCG GTGAATTGCG CTACGAGGCG CGGTTTGTCT GGAACGACGG CTCCGTGCAT
TGGGTGCGCG TGCTGGGCCG CTATCTCTAC GACAGCACGG GCGAGGCCAT TTCGCTATCC
GGCATCGTGA TGGACATTAC GGACCGGATC GAATCGGAAC AGCGGCTGAA AGTGAATGAA
GAGCATTTGC GGACGCTCAT TGAACAGGCA CCGGTAGCGA CGGCATTATT TGTTGGAAAA
GATATGGTGA TCGACATCCC CAACGAGGCG ATGCTGAAAG TTTGGGGAAA AGGGCGGTCG
GTGATCGGCA AACCGCTGCG CGACGCACTG CCCGAGCTCG AAGGCCAGCC ATTCCACGCG
ATCCTTGACC GGATTTACCA GTCGGGAGAG GCGCATTCCG AGCAAGGTGC ACGGGCCGAC
CTGGTAGTCG ACGGCCGGCT GCAAACGTTT TATTACGACT ATACTTACAA ACCCCTCAAA
AACTCGCGCG GGGAAGTGTA CGCGATCCTC GACATGGCCG TAGACGTTAC CGAGCAGGTG
ATTTCACGCC AGGAACTGGA ACGAAGCGAA GAGCGCTACC GCCAGCTTGC CAGCGAGCTC
GAAAGGCGCG TCCGCCAGCG TACGGACGAG CTGCACCAGG CCAACATCGA GCTGGTGAAT
TCAAATAATA ACCTGCAACA ATTTGCCTAC GCCGCGAGCC ACGATATGCA GGAACCGCTG
CGCAAAATCC AGTCGTTCGG CTCCCGGTTG CTCTCGACCT ATTCCGATAA GCTCGACGAC
AATGGCAAAT ACATGCTCAA CCGCATTCAG GACGCTTCCA AAAGAATGTC GGCGATGATC
GACGACCTGC TGGCCTACTC ACGGCTTACC ACTCGCGAAG GTGAATTTAC GCCGGTAGAG
CTTGGAGAAA TCGTTACATC GGTCCTGGCC GACCTCGAAA TTTCCATTCA GGAACAAAAA
ACGGAAGTAA TCGTAGAAGA AATGCCGGTA GTATGGGGCA ATGGCGCGCA GCTGACGCAG
CTGATCCAGA ACCTCGTGAG CAATGCCGTC AAATACCGTC TTCCCGAGCA GCATTCGACG
ATCCGCATTG CCTACCGCGA TGTGGACGCG GCCGAAAAAG AAACGCTGCC CAAGCTCCTG
CCCGACCACC ACTACATTCG CCTCGAAGTA AGCGACAACG GGATCGGTTT CGACGAGATT
TACCTCGACC GCATTTTCCA GATGTTCCAG CGGCTGCACG GGCGCAGCGA GTTTTCGGGA
TCGGGCATTG GGCTGGCATT GTGTAAAAAG GTGGTTCAGA ACCACCATGG CTACATTACC
GCCAAAAGCC AGCCGGGCCG AGGCGCCACT TTTATCGTAT ACCTGCCGCA ACCGCTTTGA
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| Protein sequence | MTDTLNARKD DLLLAIERFK LVAKATHDVI WDWDLERGTL WWNEGMQEIF GYRPEEVEGG
PNSWFDRIHP DDQDEVIKKI YEVINQGESN WSDFYRFRRA DGSYAHVHDR GYTIQINGKP
VRMVGSMMDI SRQLRSDRAR EESEESLKFA IQAAQLGTWN LNPIDRTALF NDRCKELYGY
PAEADMYYER LVQFVHPADR SRVIDAIERA LDPLQRTPYD VRYRVNGATD RKLRWLHCTG
QAYFDQEGTP YRFSGISREI TSEVTSQEKI AWADQQAAMT IEGSGAGSFM VTLATNEIIY
SPTMAHIITG SENANMTREL LLESLHPEDV GIRNNAYAEA EASGELRYEA RFVWNDGSVH
WVRVLGRYLY DSTGEAISLS GIVMDITDRI ESEQRLKVNE EHLRTLIEQA PVATALFVGK
DMVIDIPNEA MLKVWGKGRS VIGKPLRDAL PELEGQPFHA ILDRIYQSGE AHSEQGARAD
LVVDGRLQTF YYDYTYKPLK NSRGEVYAIL DMAVDVTEQV ISRQELERSE ERYRQLASEL
ERRVRQRTDE LHQANIELVN SNNNLQQFAY AASHDMQEPL RKIQSFGSRL LSTYSDKLDD
NGKYMLNRIQ DASKRMSAMI DDLLAYSRLT TREGEFTPVE LGEIVTSVLA DLEISIQEQK
TEVIVEEMPV VWGNGAQLTQ LIQNLVSNAV KYRLPEQHST IRIAYRDVDA AEKETLPKLL
PDHHYIRLEV SDNGIGFDEI YLDRIFQMFQ RLHGRSEFSG SGIGLALCKK VVQNHHGYIT
AKSQPGRGAT FIVYLPQPL
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