Gene Dfer_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0292 
Symbol 
ID8223858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp330249 
End bp331262 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID644928170 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003084727 
Protein GI255034106 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0260257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCT TTCCGGTTTC CAATTCCAAT CTTTCGCCCT TTCACCTCGG CCAGTTTATT 
CAAAAACACT ATTTCCCCGG CCAGGATGTG GAATGCAGCA TATTAAAAAC CGGCATCAGC
GACACTTACC TGGTTACGAC GCCTGAAAAC CCCTACATTT TCCGGGTATA CAGCCATCAG
TGGCGCACAC GCACCGAGAT CGCGGAAGAA CTGCGGCTTT TGACACACCT CCGCAAGCAC
GGCATTGCCG TTTCCTACCC CATTGCGGAC CTTGCAAACA CCTGGATACA AAGCTTTCAA
GCGCCCGAGG GCGAGCGTTT CGCGGTGTTA TTCTCCTATG CGGAAGGTAA AAAAGTGCTC
AATTTTGATG CTGAAACGCA TTTCCGGGTG GGCGAACTGA TGGCGCAAAT GCATTTACTG
ACAAAAGATT TTGCGCTGCA ACGCGTCACC TATTCCGAAA AGGAGCTGCT CATCGACTCC
CTCGCGCAGG TCGGCCGCTT CCTGCCCGCC GACACCGAGG AGATGCAATA CATGCAAAAA
ATACAGAAAT ACCTGATCGG CGAACTGCAA AATGCCAGCC AAAGCGACCT GCGCAAAGGC
GCCGTGCACC TCGACCTTTG GTTCGACAAC ATGAATGTGG CTTCCGACGG CGGGATTACC
TTCTTCGATT TCGATTTCTG CGGAAATGGC TGGCTTTGTC TGGATATGGC CTATTATATG
CTACAAATCC ATTCTACGGA AAAGGAAGAT GCCGAACGCG AGCTCAAAAC CGCGCAATTT
ATGCTCGGTT ATGAGTCCGT TACGCCGGTA AGTAATGAGG AAAAACGGCT GATCCCGATA
TTGGGCATTT GCCTGTATTT CTTCTACCTG GGCATTCAGT CGCAGCGGTA CGATAACTGG
TCGAATGTGT TTCTGAATGA GATTTACCTC AAAAGGTTTA TTAACCTGCT CCTCAAAAAA
TACTTCGACT ATCACCAGCT TGGCGAACCC GCAGCCTCCC GCGATCTGCA TTGA
 
Protein sequence
MNVFPVSNSN LSPFHLGQFI QKHYFPGQDV ECSILKTGIS DTYLVTTPEN PYIFRVYSHQ 
WRTRTEIAEE LRLLTHLRKH GIAVSYPIAD LANTWIQSFQ APEGERFAVL FSYAEGKKVL
NFDAETHFRV GELMAQMHLL TKDFALQRVT YSEKELLIDS LAQVGRFLPA DTEEMQYMQK
IQKYLIGELQ NASQSDLRKG AVHLDLWFDN MNVASDGGIT FFDFDFCGNG WLCLDMAYYM
LQIHSTEKED AERELKTAQF MLGYESVTPV SNEEKRLIPI LGICLYFFYL GIQSQRYDNW
SNVFLNEIYL KRFINLLLKK YFDYHQLGEP AASRDLH