Gene Dfer_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0280 
Symbol 
ID8223846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp320156 
End bp320524 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content43% 
IMG OID644928158 
ProductHicB family protein 
Protein accessionYP_003084715 
Protein GI255034094 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.073142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATT CGCTATCCTA TGATGGTTTT ACGGCCAATA TACAATTCAG CCCGGCCGAC 
GAAGTGTTTT TCGGGAAGCT GATCGGCGTT AATGACCTTG TAACATTTGA GGGAACTTCT
GTTGAAGAAC TGAAACAAGG CATGAAGGAC GCCGTTGATG ATTATATCGA AACTTGCAAG
GCCCTGGGCA AGTTGCCTGA TAAGTCCTAC AAAGGTGTTT TTAATGTGCG CGTTTCATCT
GAGTTGCATA AAAAAATCGC ACTGCTTGCA TCGCAGTACG ACGTGACTTT GAATGATTTT
GTAAAATCGG TGTTACAGTA TGCATCGGCG CATCAAGAGC TTGGTGATGA AGTGTTTGGA
CTTCGATAA
 
Protein sequence
MINSLSYDGF TANIQFSPAD EVFFGKLIGV NDLVTFEGTS VEELKQGMKD AVDDYIETCK 
ALGKLPDKSY KGVFNVRVSS ELHKKIALLA SQYDVTLNDF VKSVLQYASA HQELGDEVFG
LR