Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0265 |
Symbol | |
ID | 8223831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 299364 |
End bp | 302753 |
Gene Length | 3390 bp |
Protein Length | 1129 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644928144 |
Product | Non-specific serine/threonine protein kinase |
Protein accession | YP_003084701 |
Protein GI | 255034080 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.355266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.1182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC ATGACCCTTC CGGCGTACCG GCACCCGGAC AGCATAATTT TGTCTTCCTC GATTTCAACA TTTCCGAGCT GTCGGTTTCG CATATCCTCA ATAACAGCGC AGAAATGCCT GCAACGGAAA AAAGGGGCTT TTTCGACATC CAACCGCACG AAATCGATGT CGACTACGCC TCATTCCGCG TGGCCGCCAC GCTCAGCGAG ACATTGAAAG TGGTGGTGAG GCAGGATCAC CGGGCCGTGA ACCTCTATTG CGAATGCACC CGTCCGAAGC GTAAACTGTG CGAGCACCAA AGCCAGGTTT TGTATAACCT CCTCAACCGC CGCGACCTGC GCGCATTCTT CGACGAAAAG CTCCGGCACG AGAAAATCAG AGAGGAGGCT GTATTCTACG GATTGGAGGG TGAAAGCGAC CTGGATGCAT ATTTTCAGCT TGAATATACG GGCCGGGAGC TGCGCATTAA ACCAAAATTG AAAGAACTAA TCCCGCTCGA TACGCTTTCG GTGGAGGCAT TGCAGGAACA GCTCGTGGCG AACCCGCCCC GGGAGTTACC CGGCCCGAAA CCGCAGGCAG CGGACACAAA AACGATCGTG ACCATCGGCC TCAACAAGTA TTACGACCAT TTCTACATGG AAATGTACGA GGCGCCCGTC ACGCGGAACG GGAAGCTGAA AAACCCGTTC ACTCCCCTTA ACCCGCTCGA ACAGCTCTGG AAAACGCAGG ACGCGCAGGA GATCAAATTC CACACCGCGG TGGCGGCATT TCAGAATAAT TTCCGGAAAA AGAACCCGGA AACCGACCTG CCGGGGCTGT ATGCGATTGT TCAGAACCCG CTGAAACTGG ATTTTTACTA CCATAACCCG TCGGTTTCGG AGAATATCAA TGCGGCCTCG CTCCTACCCG TGAAGCTGGC AGCAACTCCG GTCGACCTCC AACTGACGAT TGATAAGAAA GACCCTTTTC TTCAAATTAA AGGCGAGCTG ATCCTCAACA GCGTGCATCT GGATATCGAA AGCGTGGAGT TCCGTTATGA TTATTTTGTG TTGTACAAAG ATTCGCTGCA TCTGATCGAA AGCACGGACA TCCTGCGGGT GCTGCAATTT TTCAGGCAGC ATAACCAGCG CATTTACATT CACGAGTCAA AATTTGAGGC ATTCAGGGCC AGTGTGCTGG CGAAGCTGGG GAAAAGCATT CGTATCAATT ATACGTATGT AAAACCGGCC ACGCCCGCGC AGCGCGAAGA GCAGGGGTTT GACCTGGAAA TCGAGAAAAT CATTTACCTC GAAGATGTCG GCAACTATGT GCTGATCACG CCCGTGCTGA AATATGGCAA GGTAGAGGTG CCTTTATTCT CAAAAAACGA CATTTATGCC GTCGATAGCC ACGGTAACCC TTTCATGGTG AAGCGCGACG AGGAAGCTGA GCTGCGTTTC GGCAGCGCGG TCATGCGCCA GCATCCCGAT TTCGAAGAAC AGCTCGGCAG GGAATTCTTC TACCTTCACC GCGCGGCATT CCTGAGCGAA GACTGGTTTC CGAATGCATT TGAAGAATGG CAACACCAGG GCGCGACGAT CCTGGGTTTC AACAAGCTCA CCAAGAATCG CCTCAATCAG CATAAGGCCA AAATATCGGT GCATGTGGTC AGCGGCATCA ACTGGTTCAG TACCACGGCC AATGTGGCTT TCGGCAAGCA GAAAGTGACG CTCAAACATT TGCACAAGGC TGTCAAAAAC CGCAGCAGAT ACGTGGAACT CGGCGACGGC ACACTTGGCA TCCTGCCCGG GGAATGGTTG GAAAAGTTTG CCAAATTTTT CGATGCGGGT GAGATTGCGG GCGAGGTGAT CCAAACGCCC AAAATCCGTT TCGCGTCTGT GGAAGAAATG TATGAAGGCG CTATGCTCGA CCGCGACGTG CAGGAACAGA TCGCATTTTA CCACTCGCGC TTCGGGGATT TCCGGGCCAT CGAGCCGGTA GCCGTGCCGG GGACATTAAA AGCCACGCTG CGGGATTACC AGAAACAGGG CCTCAACTGG CTGAATTTCC TCGACGATTT CAATTTCGGA GGCTGCCTGG CCGATGATAT GGGTTTGGGA AAAACCTTGC AAATCATCGC ATTCCTGCTC CTGCAACGAA AGAAACAGGT ACGGAACACC AACCTGATTA TCGTGCCCAC TTCCCTGATC TTCAACTGGC AGGCCGAAGT GGAGAAGTTT GCGCCAAGCA TTAAAATGCT GACCATCTAC GGCGCCGACC GCGTGAAGGA CGTTACCGAT TTCGATCGAT ACGAGATCGT GCTGACTTCC TACGGCACGT TGCTTTCGGA TGTAAATTTC CTGAAAAAGT ATCATTTCAA TTACATCATT CTCGACGAAT CTCAGGCCAT TAAAAATCCT GAATCGCAGC GCTATAAGGC CGTTCGGCTG CTGCAAGCAC GGAACCGGCT GGTCATGACG GGAACGCCCG TAGAGAATAA TACATTCGAC CTGTACGGAC AGCTGTCATT TGCATGCCCG GGCTTGCTGG GCTCTAAAAC GCAGTTTCGC AACCATTTCT CGATCCCGAT AGACCGGTTC AAGGACAGTG AGCGGGCCGC GGAGCTGCAA AAACGGATCA ACCCATTTAT CCTGCGGCGC ACCAAACAGC AGGTGGCGTC CGAATTGCCG GAAAAAACCG AGATGGTGAT TTACTGTGAA ATGGGCGAAG AGCAGCGCAA AGTTTATAAT GCGTACGAAC TGGAATTTTA CAATTTCCTG AACACCCGGA ACCAGGGCGA TATCGAACGC AGCAGGCTGC ACGTTTTGCA GGGACTTACC AAGCTGCGCC AGATCTGCAA CTCGCCCGCA TTGCTGCGCG ACGATCTGTA CTATGGCGAT TCGTCGGCTA AAATCGACGT GCTCATGGAA CAGATCGAGG ATACTGCGCC CTGGCATAAG ATACTGGTAT TCTCGCAGTT TACTTCCATG CTCGACCTCA TCCGCCCCAG GCTGGAAGAG CGCGGCATCG GCTATGAATA TCTCACGGGC CAAACGCGCG ACCGGGGAGC CCGGGTGGAG AATTTCCAGA CGAATGCCCA TGTGAGGATC TTCCTCATCA GCCTGAAAGC CGGCGGGACC GGCCTGAACC TGACCGAAGC GGACTACGTA TACCTCATAG ACCCGTGGTG GAACCCCGCC GTGGAAAACC AGGCCATTGA CCGCAGCCAC CGGATCGGGC AGCAGAAGAA TGTGATCGCC GTACGGCTCA TTTGCCCCGG AACGATCGAG GAAAAGGTGA TGGAGTTGCA GGAAACCAAA AAAGACCTCG CCAATGACCT CGTGAAAACG GACACGGATA TTCTCAAATC ACTCACCCGG GACGACCTGC TGGCGCTGGT ATCACGCTGA
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Protein sequence | MKKHDPSGVP APGQHNFVFL DFNISELSVS HILNNSAEMP ATEKRGFFDI QPHEIDVDYA SFRVAATLSE TLKVVVRQDH RAVNLYCECT RPKRKLCEHQ SQVLYNLLNR RDLRAFFDEK LRHEKIREEA VFYGLEGESD LDAYFQLEYT GRELRIKPKL KELIPLDTLS VEALQEQLVA NPPRELPGPK PQAADTKTIV TIGLNKYYDH FYMEMYEAPV TRNGKLKNPF TPLNPLEQLW KTQDAQEIKF HTAVAAFQNN FRKKNPETDL PGLYAIVQNP LKLDFYYHNP SVSENINAAS LLPVKLAATP VDLQLTIDKK DPFLQIKGEL ILNSVHLDIE SVEFRYDYFV LYKDSLHLIE STDILRVLQF FRQHNQRIYI HESKFEAFRA SVLAKLGKSI RINYTYVKPA TPAQREEQGF DLEIEKIIYL EDVGNYVLIT PVLKYGKVEV PLFSKNDIYA VDSHGNPFMV KRDEEAELRF GSAVMRQHPD FEEQLGREFF YLHRAAFLSE DWFPNAFEEW QHQGATILGF NKLTKNRLNQ HKAKISVHVV SGINWFSTTA NVAFGKQKVT LKHLHKAVKN RSRYVELGDG TLGILPGEWL EKFAKFFDAG EIAGEVIQTP KIRFASVEEM YEGAMLDRDV QEQIAFYHSR FGDFRAIEPV AVPGTLKATL RDYQKQGLNW LNFLDDFNFG GCLADDMGLG KTLQIIAFLL LQRKKQVRNT NLIIVPTSLI FNWQAEVEKF APSIKMLTIY GADRVKDVTD FDRYEIVLTS YGTLLSDVNF LKKYHFNYII LDESQAIKNP ESQRYKAVRL LQARNRLVMT GTPVENNTFD LYGQLSFACP GLLGSKTQFR NHFSIPIDRF KDSERAAELQ KRINPFILRR TKQQVASELP EKTEMVIYCE MGEEQRKVYN AYELEFYNFL NTRNQGDIER SRLHVLQGLT KLRQICNSPA LLRDDLYYGD SSAKIDVLME QIEDTAPWHK ILVFSQFTSM LDLIRPRLEE RGIGYEYLTG QTRDRGARVE NFQTNAHVRI FLISLKAGGT GLNLTEADYV YLIDPWWNPA VENQAIDRSH RIGQQKNVIA VRLICPGTIE EKVMELQETK KDLANDLVKT DTDILKSLTR DDLLALVSR
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