Gene Dfer_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0256 
Symbol 
ID8223822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp287424 
End bp288302 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content54% 
IMG OID644928135 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003084692 
Protein GI255034071 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.022774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGA TTGAATCCAA AGCGGGAACG ACCGCCGAGC CGGTTAAGCT GTTTGTACAT 
GAAGCAGGGC AGGGCAAGCC GGTCGTATTT ATTTCCGGTT GGCCGCTGAG CCATGAAATG
TGGGAATACC AGTTCAATGT CCTGCCCCGG CATGGGATAC GATGCATCGG CTACGACCGC
CGCGGTTTCG GGCGGTCGGA CAAGCCGTGG AATGGTTACG ACTACGACAC ACTGGCTGCC
GACCTTAAAT CGGTGCTGGA CGAACTGGAC CTGAACGACG TCACACTCGT CGGTTTTTCG
ATGGGCGGCG GCGAAGTGAT CCGTTATCTG AGCAAATACG GCAGCGCCCG GGTTTCCAAA
GCCGTGCTCA TCAGCACCGT GCTTCCATAT ATGCTGAAAA CCGAAGATAA TCCCGACGGC
CTTCCACAGG AAATGTTTGA TGGATTTGTA AAGGAGATCG AGGACGACCG ACCCAAATTC
CTGGCCGGTT TTGCCAAAGA CTTTTACGGA AACGGGTTTC TCAACCATTC GGTAAGCGAC
GAAATGCTGC ATTGGCACAG CATTCTGGCA TTGCAGGGAT CGGGGCGCGC CACCACTCAA
TGTATCCGCA GTTTCAGCGC CACCGATTTC CGGAACGAAA TATCGCTTCT GGACGTGCCG
GTGCTCATTA TCCACGGCGA AGACGACAAA ACGGTGCCCA TTAAAGTGAG CAGCGACCGG
ACGTCGGCAA TGCTGCCGGG CGCCGAATAC ATTATCTACG AAAGCGCGCC GCACGGCCTG
TTTATCACCC ACAAGGAACG GCTGAACGAG AACCTCATCC AGTTTATCAA CCAGCAGGTA
GTCACGATCA GTAATCCTTA TACGGACATT CCAAGCTGA
 
Protein sequence
MRLIESKAGT TAEPVKLFVH EAGQGKPVVF ISGWPLSHEM WEYQFNVLPR HGIRCIGYDR 
RGFGRSDKPW NGYDYDTLAA DLKSVLDELD LNDVTLVGFS MGGGEVIRYL SKYGSARVSK
AVLISTVLPY MLKTEDNPDG LPQEMFDGFV KEIEDDRPKF LAGFAKDFYG NGFLNHSVSD
EMLHWHSILA LQGSGRATTQ CIRSFSATDF RNEISLLDVP VLIIHGEDDK TVPIKVSSDR
TSAMLPGAEY IIYESAPHGL FITHKERLNE NLIQFINQQV VTISNPYTDI PS