Gene Dfer_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0254 
Symbol 
ID8223820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp284929 
End bp286098 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content56% 
IMG OID644928133 
Productglycosyl transferase group 1 
Protein accessionYP_003084690 
Protein GI255034069 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.401969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTAC TGATTGTTCA CAACCAATTA TGGGCGCATT ATAAATCGAA GCTGTTCAGC 
GAGATTGACC GGGCGATGAA GCAGGCCGAT CCGTTGGATG AGCTGCTTGT GGCGCAGATC
GCATTGTACG AGGCGAGCCG GAAAGTAATG CAAAATGACA ATACGGTCAT TTATGATTAT
CCTTATAAAG TCCTTTTCGA ACGCGCCCTC GATCAGGTCA CGCTGGCTGA GCGTCGGACA
GCACTTTTCA GGATTTTCAA CGAATACCGG CCGGATGTGC TCAACATCAC CGGCTATTTC
GATTGGGCGC AGGTATTGCT CATGTTTTAC GCCCGCTGGA AAGGTGTGAA AGTTGTGATT
TCCTCCGAGT CGTCCTCGGC GGACCATAAC CGCTCGGCCT GGAAGGAATG GGTTAAAAAA
GTGATCGTAA AGCGCGCCCA TGCATTTTTT TGCTTTGGAA AAACATCCGC GGAATACCTG
GAAAGTCTGG GCGTGAAACG GGATGCGATT AAAGTAAGGA ATGCGGCGGT GATCGACGAG
CAGCTGATCC GGCAGCGCTA CGACGAAGCG AAGGCCTCAC AAGGTGGCGT TGCAACGGGC
AATGCAGCTC CGAAAAAGTT CGTGTACGTG GGCAGGCTGG CGCCGGAGAA GAATTTACAG
ACATTGATCC GCGCATTTAC CCGTGCCGTC GACCACACCG GTGCGCATTG GCAGCTCCTC
TTCGTAGGCG ACGGCCCCGA TCGTGCCGAA CTGCAAAAGC TGGTGGAAGA GTCGGGTGTT
GCCGGCAAAG TTGTTTTCGC GGGCGGGTTT CCCTGGTACC AGGTACCGGG CTGGCTGGCG
CAAAGCGATG TGCTGGTGCT GCCGAGCCAA TCGGAGCCGT GGGGATTGGT GGTGAATGAG
GCGATGGTGT GCGGCATGCC GGTGATCGTG TCGGAAACCT GCGGATGTGC GGGCGACCTG
GTGCGCAACG GCGTCAATGG CTTTACATTC AATCATTCGC AGCAGCAGGA GCTCGAAAAG
CATTTAGTTT ATTTTATTCA AAACCCGGGC CGCATCGGCG AAATGGGACG CGAGTCGCTG
AAACTGGTCG CGCCGTTCGC TTCGGGCCCG GTGGCCGGGC AGATGGCCCG GACCTACCGC
GAACTGGCAG GCGGCCATCG GCGCGTATAA
 
Protein sequence
MRVLIVHNQL WAHYKSKLFS EIDRAMKQAD PLDELLVAQI ALYEASRKVM QNDNTVIYDY 
PYKVLFERAL DQVTLAERRT ALFRIFNEYR PDVLNITGYF DWAQVLLMFY ARWKGVKVVI
SSESSSADHN RSAWKEWVKK VIVKRAHAFF CFGKTSAEYL ESLGVKRDAI KVRNAAVIDE
QLIRQRYDEA KASQGGVATG NAAPKKFVYV GRLAPEKNLQ TLIRAFTRAV DHTGAHWQLL
FVGDGPDRAE LQKLVEESGV AGKVVFAGGF PWYQVPGWLA QSDVLVLPSQ SEPWGLVVNE
AMVCGMPVIV SETCGCAGDL VRNGVNGFTF NHSQQQELEK HLVYFIQNPG RIGEMGRESL
KLVAPFASGP VAGQMARTYR ELAGGHRRV