| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0251 |
|---|
| Symbol | |
|---|
| ID | 8223817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 282246 |
|---|
| End bp | 282812 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644928130 |
|---|
| Product | putative colanic acid biosynthesis acetyltransferase WcaF |
|---|
| Protein accession | YP_003084687 |
|---|
| Protein GI | 255034066 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA TCTCAGGAAC CCAAACCAAT CTGTCCGTAT ATAACAACGA TTGGTACAAT
CCGGGCAGCT TTCCGAAGCT GGTAACCTGG TATTTGATCA ACCGGCTGTT TATTCACACA
CACATTCCCT ACCCGTCGGC ATTGAAAGTG GCATTGCTGC GGTTGTTTGG AGCGAAGATC
GGGAAGGGCG TGGTGATCAA ACCCAAAGTG AATATCAAAT ACCCGTGGTA CCTGCACATC
GGCGACCACG TCTGGATCGG CGAGGAGGTG TGGATCGACA ACCTCACTTT GGTGATTATT
GAATCAAATG CCTGCCTGTC GCAGGGAGCT ATGCTGCTCA CCGGCAATCA TAATTATCGG
AAAAGCACTT TCGACCTGAT TGTGAAGCCC ATCACGCTCG GGCCGGGGTC GTGGATCGGC
GCCAAAGCCA CGGTGTGCCC GGGCGTGCAG GTAGGTTCGC ACGCGCTGCT TACCGTCGGT
TCGGTGGCGA CGAGCCATCT GGAACCATTC GGGATTTACC AGGGAAATCC CGCAAAATAT
GTCAAAACAA GAATTATAAC CAGTTGA
|
|---|
| Protein sequence | MEKISGTQTN LSVYNNDWYN PGSFPKLVTW YLINRLFIHT HIPYPSALKV ALLRLFGAKI
GKGVVIKPKV NIKYPWYLHI GDHVWIGEEV WIDNLTLVII ESNACLSQGA MLLTGNHNYR
KSTFDLIVKP ITLGPGSWIG AKATVCPGVQ VGSHALLTVG SVATSHLEPF GIYQGNPAKY
VKTRIITS
|
|---|
| |