Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0248 |
Symbol | |
ID | 8223814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 277776 |
End bp | 280049 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644928127 |
Product | Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+))., Phosphate acetyltransferase |
Protein accession | YP_003084684 |
Protein GI | 255034063 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA AGATCAGAAA AGAAGACGCG CTATACTACC ATTCCAAGGG TAGGCCAGGA AAAATACAGG TAATTCCCAC CAAAGAAACG AGTACCCAAC GCGACCTTTC GCTTGCCTAT TCGCCCGGCG TGGCAGAACC CTGCCTGGAA ATCGCCGACA ATGTCGAAAA TGCCTATCAA TACACCGCCA AAGGCAACCT GGTAGCGGTA ATCAGCAACG GTACCGCGGT GCTGGGCCTC GGCGACATCG GCCCCGAAGC TTCCAAACCC GTCATGGAAG GAAAAGGACT GCTCTTCAAG ATTTACGCAG ACATCGACGT TTTTGACATA GAACTCAATA CCAAGGACGT CGATGAATTT GTAAGAACGG TCAAAATCCT CGAACCGACA TTCGGTGGTG TCAACCTCGA AGACATCAAA GCACCCGAAT GCTTCGAAAT CGAAGCGCGC CTCAAAAAGG AGCTGAACAT CCCCGTCATG CACGACGACC AGCACGGAAC GGCGATCATC AGCGCGGCGG CTATGCTCAA TGCATTGAAA CTCGTCAACA AAGACATTAA CGACATCCGC ATCGTTGTTT CCGGCGCCGG TGCCTCGGCG GTGTCGTGTA CCAAACTCTA CCTTTCGCTG GGCGCCAACC CGAAAAACAT CGCGATGTTC GACACCAAAG GCCATATCCA CAATGGCCGG ACGGATTTGA GCGATATGAA AAAGCAGTTC GCTACGGACA ATGCTTACGA ATCGCTCGAA GAAGCCATGG TAGGCGCCGA CCTGTTCCTC GGCCTTTCCA CCGCCGATAT CGTCTCGAAA GACATGGTGA AATCCATGGC CAAAGACCCG ATCGTGCTCG CAATGGCCAA CCCGAACCCC GAAATACCGT ACCCCGACGC CGTGGAAGCC CGCGAGGACG TGATCATGGC CACAGGCCGG TCCGACTATC CCAACCAGGT GAACAACGTG CTCGGTTTCC CGTACATATT CAGGGGCGCG CTCGACGTGC GTGCGACGGA GATTAACGAG GAAATGAAAC TTGCCGCCGT ACACGCCCTG GCCGACCTGG CCACCAAGCC GGTGCCCGAC ATTGTGAACC TGGCTTATAA TGAGACGAAT ATTGTTTTTG GTAAAAATTA TATTATTCCA AAACCGGTGG ACCCTCGCCT GCTGACGACC GTAGCGCCAG CTGTGGCCAA AGCGGCCATT GAAACCGGCG TGGCACGGAA GGTGATTACC GACTGGGATG CCTACGAGCA GGAGCTGTCG AGCCGCCTCG GACGGAACGA GCAGATCTCG CGCGTGATCC TCAACAAAGC GAAACTGTCG CCGAAAAAGG TCGTTTTCGC CGATGCGGAA AACATCCAGG TGCTGCGCGC TGCCCAGCAG GTGCGCGATG AAGGCATTGC CACACCTATT TTGCTGGGTA ATAAGGAAAC GATCCTGCAT TTGATCCGCG AAAGCAAACT CGACCTCGCC GACGTGGCGA TCATCGACCC GCGCGCCGAC GAAAGCGACC CGATGATCGA GCGGTATGCC GAGAAATTGT ACGAAAAACG CAAACGCAAA GGCCTCACGC CGATCGAAGC GCGCAGGACG ATGTATTTCA AAAGCTACTT CGGCTCGATG ATGGTCGAAA ACGGCGAGGC CGACGCATTC ATTTCCGGCC TTACCCGAAC CTATCCCGAC ACCATCCGTC CGGCATTGCA CGTGATCGGC AAGCAGGAAG GTGTGAACAA AGTGGCGGGT ATGTACATTT TGCTCACGCC GAAAGGGCCG CTGTTCTTCT CGGATACGAC CGTGAACCTC GACCCGACCG TCGACGACAT TGTCGAAATC ACCGAACTCA CTGCCAAGGC CGTCGAACAA TTCAACATCC AGCCTCGCAT TGCATTGGTA ACCTACGCCA ACTACGGCTC TGCCAAAGGC GCCGACGCCG AGAAAATGCG CGATGCCACG GCGATCCTCA AAAAACGGAA CCCGTCGATG ATCGTGGAAG GTGAATTGCA GGCCCACCTG GCGTTTAATA CGCATCTATT GAAGGAAAAC CACCCGTTCA GCGACCTGGT GGACGGCGGC GCGAACACGC TGATCTTCCC GAACCTTTCG GCGAGTAACA TCGCCTACAA TTTGCTGAAA GAAGCGGCCG AGCTCGAAAC CATCGGGCCG ATCCTCCTGG GCCTTAAAAA GCCTGTACAC GTGCTGCAAT TGGGTAGCTC GGTGCGTGAG ATCGTGAACA TGGTGGCGAT TGCCGTAGTG GAAGCGCAGA TGAAAGGTCA GTAG
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Protein sequence | MNKKIRKEDA LYYHSKGRPG KIQVIPTKET STQRDLSLAY SPGVAEPCLE IADNVENAYQ YTAKGNLVAV ISNGTAVLGL GDIGPEASKP VMEGKGLLFK IYADIDVFDI ELNTKDVDEF VRTVKILEPT FGGVNLEDIK APECFEIEAR LKKELNIPVM HDDQHGTAII SAAAMLNALK LVNKDINDIR IVVSGAGASA VSCTKLYLSL GANPKNIAMF DTKGHIHNGR TDLSDMKKQF ATDNAYESLE EAMVGADLFL GLSTADIVSK DMVKSMAKDP IVLAMANPNP EIPYPDAVEA REDVIMATGR SDYPNQVNNV LGFPYIFRGA LDVRATEINE EMKLAAVHAL ADLATKPVPD IVNLAYNETN IVFGKNYIIP KPVDPRLLTT VAPAVAKAAI ETGVARKVIT DWDAYEQELS SRLGRNEQIS RVILNKAKLS PKKVVFADAE NIQVLRAAQQ VRDEGIATPI LLGNKETILH LIRESKLDLA DVAIIDPRAD ESDPMIERYA EKLYEKRKRK GLTPIEARRT MYFKSYFGSM MVENGEADAF ISGLTRTYPD TIRPALHVIG KQEGVNKVAG MYILLTPKGP LFFSDTTVNL DPTVDDIVEI TELTAKAVEQ FNIQPRIALV TYANYGSAKG ADAEKMRDAT AILKKRNPSM IVEGELQAHL AFNTHLLKEN HPFSDLVDGG ANTLIFPNLS ASNIAYNLLK EAAELETIGP ILLGLKKPVH VLQLGSSVRE IVNMVAIAVV EAQMKGQ
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