Gene Dfer_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0242 
Symbol 
ID8223808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp270652 
End bp271245 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID644928121 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003084678 
Protein GI255034057 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAG TAGAGCGAAG AGAGCGGCTT AGAATACAGG TACGCTCAGA CATCGTGAAA 
ACAGCCAAGG ACATTGCCAG GGAAGATGGC TGGACGGCTG TTTCGATTCG CAAAATTGCT
GATGTGATTG AATACAGCCC GCCTATTCTC TACGAATATT TCGAAAGCAA GGACAAACTG
CTGGAAGCCA TCCGTATGGA AGGTTTCGAT TATTTGCAGG CGGAGTTCGT GAAGATAAAA
GGCCATTTCA GCAACCCGCA GAAGCAGCTC GTGGAAGTGG CGCAGACGAT CTGGCATTTC
GCCGTCGAAA ACCCGGAGGT TTTCCAGGTG ATGTTCAACC TCGAAGGCGC TTATTGCGAT
TCGAAAAAGG CTTATGGCCA CGCGATGAGC ATCAAGGATA ACCCGGTTTG GGAAATGATC
GCAGGGCTCC GTCCGAAATC CGGGGAGCTC GTTACGAAGA CTTATTATGA ATGGTGGTGC
CTCACTTTCG GGTTTATCAG CATTACCATG ACTACACAGC CACGTTACGC ATTTCCGCAG
GCTGAGCCTG TGTATATGGA AGGCATCCGG AGATTTATCC GGAGTATTAT GTAA
 
Protein sequence
MGIVERRERL RIQVRSDIVK TAKDIAREDG WTAVSIRKIA DVIEYSPPIL YEYFESKDKL 
LEAIRMEGFD YLQAEFVKIK GHFSNPQKQL VEVAQTIWHF AVENPEVFQV MFNLEGAYCD
SKKAYGHAMS IKDNPVWEMI AGLRPKSGEL VTKTYYEWWC LTFGFISITM TTQPRYAFPQ
AEPVYMEGIR RFIRSIM