Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0242 |
Symbol | |
ID | 8223808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 270652 |
End bp | 271245 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644928121 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003084678 |
Protein GI | 255034057 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATAG TAGAGCGAAG AGAGCGGCTT AGAATACAGG TACGCTCAGA CATCGTGAAA ACAGCCAAGG ACATTGCCAG GGAAGATGGC TGGACGGCTG TTTCGATTCG CAAAATTGCT GATGTGATTG AATACAGCCC GCCTATTCTC TACGAATATT TCGAAAGCAA GGACAAACTG CTGGAAGCCA TCCGTATGGA AGGTTTCGAT TATTTGCAGG CGGAGTTCGT GAAGATAAAA GGCCATTTCA GCAACCCGCA GAAGCAGCTC GTGGAAGTGG CGCAGACGAT CTGGCATTTC GCCGTCGAAA ACCCGGAGGT TTTCCAGGTG ATGTTCAACC TCGAAGGCGC TTATTGCGAT TCGAAAAAGG CTTATGGCCA CGCGATGAGC ATCAAGGATA ACCCGGTTTG GGAAATGATC GCAGGGCTCC GTCCGAAATC CGGGGAGCTC GTTACGAAGA CTTATTATGA ATGGTGGTGC CTCACTTTCG GGTTTATCAG CATTACCATG ACTACACAGC CACGTTACGC ATTTCCGCAG GCTGAGCCTG TGTATATGGA AGGCATCCGG AGATTTATCC GGAGTATTAT GTAA
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Protein sequence | MGIVERRERL RIQVRSDIVK TAKDIAREDG WTAVSIRKIA DVIEYSPPIL YEYFESKDKL LEAIRMEGFD YLQAEFVKIK GHFSNPQKQL VEVAQTIWHF AVENPEVFQV MFNLEGAYCD SKKAYGHAMS IKDNPVWEMI AGLRPKSGEL VTKTYYEWWC LTFGFISITM TTQPRYAFPQ AEPVYMEGIR RFIRSIM
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