Gene Dfer_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0234 
Symbol 
ID8223800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp262356 
End bp262847 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID644928113 
ProductNUDIX hydrolase 
Protein accessionYP_003084670 
Protein GI255034049 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.425088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.397447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGACGT TAAACGCAGA CATAGGCACT ATTTATGGCG GTTCCGTACG TGTACGCGTA 
TGCGGAATCT GCGTGCATGA GAACCGTATC CTGCTCGTAA ACCATTTGCT GTACGGGCCC 
GACGGCGCCT TCTGGTCGCC TCCGGGTGGC GGCATTTACT TCGGCGAAAC GGCTGAACAT 
GCCCTCGCCC GCGAGTTCCG GGAAGAAACG GGCCTGGAAG TGACGGTGGG GCAATTGCTG 
TTCGTGAACG AGCATATCGC CGATCCGCTC CATGCGGTAG AACTGTTTTT TGAAATAACT 
TCCTTTAAGG GCCAGCTCGC TGCCGGCTTT GACCCCGAAA TGGCCGCCGA CGGGCAGGTT 
ATCCGCGACG TCCGGTTTAT GGCCTGGGGC GAGATCGAGG CATTGGAGCC ACAGCAGCGT 
CACCGCATTT TGAACAGCGC CGGCTCTCTG GCAGGGATTT TTGAACTGAA CAAATACATC 
ACCGGTGATT AA
 
Protein sequence
MQTLNADIGT IYGGSVRVRV CGICVHENRI LLVNHLLYGP DGAFWSPPGG GIYFGETAEH 
ALAREFREET GLEVTVGQLL FVNEHIADPL HAVELFFEIT SFKGQLAAGF DPEMAADGQV 
IRDVRFMAWG EIEALEPQQR HRILNSAGSL AGIFELNKYI TGD