Gene Dfer_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0233 
Symbol 
ID8223799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp261803 
End bp262225 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content49% 
IMG OID644928112 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_003084669 
Protein GI255034048 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.193926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.17761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AGCCTGTCAA TGCGATTTGG TCGGTAACGC AGGACAACAC AGTGTTTGAG 
GCTCTGGAAC TCATGGCCGA GAAGAACATT GGGGCGGTTT TAGTACTTGA AGATAATGAA
TTGATCGGTA TCTTTTCCGA ACGCGACTAT GCCCGGAAAG TGATATTGCA GGGCCGCGCA
TCGAAAGATA CGCTGATCCG CGACGTGATG ACCGCCAGGG TCATAACGGT GGAAACCGAT
GCTAAAATTG AGGAATGTAT GCAAATTATG TCGGACAAGC ACATCAGGCA CCTTCCTGTG
AACCGTGATG GCCGGCTGGT AGGCATTATC TCGATCAACG ACATCGTTTC GGCGATCATC
CACGAGCAGA AAGAGCATAT TAACACGCTC GAAAGCTACA TTTCGGGAAG TCCGTATTCC
TGA
 
Protein sequence
MGNKPVNAIW SVTQDNTVFE ALELMAEKNI GAVLVLEDNE LIGIFSERDY ARKVILQGRA 
SKDTLIRDVM TARVITVETD AKIEECMQIM SDKHIRHLPV NRDGRLVGII SINDIVSAII
HEQKEHINTL ESYISGSPYS