| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0232 |
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| Symbol | |
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| ID | 8223798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 260216 |
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| End bp | 261643 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644928111 |
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| Product | ATP-dependent exoDNAse (exonuclease V) |
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| Protein accession | YP_003084668 |
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| Protein GI | 255034047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.14834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.233843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCG ACAAACTTTT GCCTTCCCAG TTACTGCGTA GAAAATTCCC TTTCAAACCC
ACCCAGGGCC AGCTCCGGTT CTTCGAACAG GCCAATGATT TTTTGATCGA AGAAAAGGGC
CTGGAACGTT ACAGGGACTG TTTTTTGCTT AAAGGATACG CTGGAACCGG GAAAACCACG
ATCATCAGCA CGCTCATTAA AGTGCTGAAA AACTTCGGGT ACAAATCTGT CCTTCTGGCC
CCTACCGGCC GCGCGGCGAA GGTCATGTCG GGCTATTCGG AAAAAATCGC GCTCACCATT
CACAAGAAGA TTTACAAGCA AACTGCCGAC GCATTTTCGG GCACATTAAC ATTCCAGCGG
CAGAAAAATT ACCACGATAA CACGCTTTTC ATCGTCGACG AAGCCTCGAT GATAACCGAC
GACGCCGATT TCGGCAGCCG CAGCCTCCTG GCCGACCTTG TCGAATTTGT GTTCGAAAAC
CCGGGCAACA AGCTGATGCT CGTCGGCGAT ACCGCCCAGC TCCCGCCTGT GGGCAAGGAA
CTGAGCCCGG CGCTGGACGC CGATTACCTG GAAAGGACAT TTTACATGTC TGTTTTTTGG
GAAGAATTGA AGGAAGTGAT GCGGCAGGAC GAGCAGTCGG GCATTCTTTT CAATGCCACG
CAGCTCCGCA ACCAGCTGGG CGTCGAGGCG AAAGAAATCC GCATCACGAC CCGCTCGTTC
CGCGATGTAT TCAAAATGAC AGGTGAAAAA CTGGAAGAAG GGCTGCGCTA CGCCTACGAC
AAATACGGCA CCGAAAATTC AATTATCCTC ACGCGTTCCA ACAAATCGGC TGTACAATAT
AATGAATACA TCCGCCGGGT GATCAATTTT TCGGAGGACG AGCTCGATGC CGGCGACCGG
CTGATGGTCG TCCGCAATAA TTACAACATC CTCGACGAGG ATTCGCCCGC CGGGTTCATC
GCAAACGGCG ATTTTGTAGA ACTGTTAAAA ATCCGGAAAA CGCAGGAAAT GCACGGCTTT
CGCTTCGCGG ATGTAACGTT ACGACTCACC GACTACGAAA AACAACCCGA ATTCGACGCC
AAGATCTTCC TTGACACGCT GCATTCGCCG TCGGCGTCGA TGTCGGCGGA AGACAATAAG
AAACTGTACG AAAGCGTCCA GCAGGATTAT TTTTACATCA AATCCAAAAA AGACCGCGTA
GAAGCATTGC GGAAAGATCC ATATCTGAAT GCATTGCAAG TCAAGTTTGC CTACGCGCTC
ACGTGTCACA AAGCGCAGGG AGGGCAGTGG AGTGCCGTGT TTATCGACCA GGGCTATTTA
CCTGAGGAAC AGATCAATAC CGAATTCATC CGATGGCTTT ACACGGCCAT TACACGGGCA
ACGGATGAGG TTTTCCTGAT GAATTTCCAC CAGCAGTTTT TCAAATAA
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| Protein sequence | MDTDKLLPSQ LLRRKFPFKP TQGQLRFFEQ ANDFLIEEKG LERYRDCFLL KGYAGTGKTT
IISTLIKVLK NFGYKSVLLA PTGRAAKVMS GYSEKIALTI HKKIYKQTAD AFSGTLTFQR
QKNYHDNTLF IVDEASMITD DADFGSRSLL ADLVEFVFEN PGNKLMLVGD TAQLPPVGKE
LSPALDADYL ERTFYMSVFW EELKEVMRQD EQSGILFNAT QLRNQLGVEA KEIRITTRSF
RDVFKMTGEK LEEGLRYAYD KYGTENSIIL TRSNKSAVQY NEYIRRVINF SEDELDAGDR
LMVVRNNYNI LDEDSPAGFI ANGDFVELLK IRKTQEMHGF RFADVTLRLT DYEKQPEFDA
KIFLDTLHSP SASMSAEDNK KLYESVQQDY FYIKSKKDRV EALRKDPYLN ALQVKFAYAL
TCHKAQGGQW SAVFIDQGYL PEEQINTEFI RWLYTAITRA TDEVFLMNFH QQFFK
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