Gene Dfer_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0219 
Symbol 
ID8223785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp246422 
End bp247975 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content52% 
IMG OID644928098 
Producthypothetical protein 
Protein accessionYP_003084655 
Protein GI255034034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000733379 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0184964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAC CATACTCAGG ATTAGCGTTC CTATTTTCGC TACTCACTTC ATCAGCGGCA 
TTCGCACAAT ATGCAACCGA TGCACTTCGG TACTCGGAAA TCACCCAGAC GGGCTCGGCG
CGTTTTCAAG GCCTGGGTGG TAACCACGCA TCCATCGGCG GTGATCCGAG CTCCATTCAC
GGCAACCCGG CAGGACTAGG CTTTTACAAC CGGTCGGAAT TTACATTCAC CCCGGCGGTG
ACCATTGCGG GCACGAAAAC CAGCTATCTC GGAAACGATA CCAAGGAAAG TAACAGTTTG
ATCAACATTC CTCAGGCATC GGTGGTGTTC ACGAGCCAGC CCGGCTTTCA GCGCAAATGG
AAACGGTCCG CATTCGGGGT TTCATTCTCG CGGCAGCAGT CATTTCAGAA TGGCTACACT
TATGGCGGGC GGAACAACAA CAGTGCCTAC ATCGACAATG TCATTGAAGG TGTAAACGGT
GCCAAAACTT CCGTAAGTGA CCTCGAAAGG GATTTCGACA GCGGCGCAAC CGGCGGCGCG
GTTGCGTACA GCATTCCGGC TGCCTATTAC CAGATGTACC TCATCAATCC TACCACCGAA
GCCGGACCTC CTTACCAGGC TTTGGACGGC AATAGTGTAG TGGACCAAAC GGGCACATTT
ACATCCAAGG GCGCGGTTTC GCAATGGACA TTTGCCTATG CTGGAAATTT GAATGACAAG
TTCTATCTCG GCGGTAACAT CGGTTTCAGC CGGATCAGGT ATGAATATTC ATCGACTTTC
AGCGACGACT ACGTGGATAG CCCCGAATTG ACCTACATTG ATCAGTTTGA AGACTTTACC
GTCAGAGGCA ACGGGTTTAA TTTCTCATTG GGCGCGATTT ATAAAATCAA TCCTATGTTC
CAGATCGGTG GAACGCTTGC CAGCCCTACA TTCAGCGCGA TAAAAGAAAC ATTCAGCCAA
AGCGTAGCTG CCGGTTATGT GGATGGCAAA GTGACCGGCC CGGACGGAAA CCTGATTACG
CCCCCATACA CCTCAATTCC CATTGCCCCG AACGACTTCG AATATAGCCT GATTGGCCCG
CTGCGAGGAA ATATCGGTGC CACGGTCTTT TTCCAAAACA AAGGCTTCCT GACCGGAACC
ATCGAGTACG CAGGTTACAG CGGCATGCGC GCCCGGACAA GCTACTTGAC CAGCGCCGAC
AACGACGCAT TCAAAACCGA TGTGAAGAGC GAAATTACAG ACACATTCCG CAACACGGTA
AACTTCCGGC TTGGCGGAGA GATCCGCGCG AATATTTTCC GTGCACGGCT CGGCGGGGCA
TACATTACCG ACCCTTATCT CGACCAAAGC GACGGCATCG ACCGCAGCAA AATCGTGGCT
TCGGCAGGCG TTGGCGTTCG CACCGACCGG TTTTTTGTCG ATTTGACAGG CACATTCACC
ACCTACAAAT CGGCCTACAC GCCTTATTAC CTGAACAATC CGATTACTTA CGGTTCGGCG
GAGATTACCA ACCGGCCGGT TAATGTGATG GTTACAGGCG GTATCTTCTT CTGA
 
Protein sequence
MSKPYSGLAF LFSLLTSSAA FAQYATDALR YSEITQTGSA RFQGLGGNHA SIGGDPSSIH 
GNPAGLGFYN RSEFTFTPAV TIAGTKTSYL GNDTKESNSL INIPQASVVF TSQPGFQRKW
KRSAFGVSFS RQQSFQNGYT YGGRNNNSAY IDNVIEGVNG AKTSVSDLER DFDSGATGGA
VAYSIPAAYY QMYLINPTTE AGPPYQALDG NSVVDQTGTF TSKGAVSQWT FAYAGNLNDK
FYLGGNIGFS RIRYEYSSTF SDDYVDSPEL TYIDQFEDFT VRGNGFNFSL GAIYKINPMF
QIGGTLASPT FSAIKETFSQ SVAAGYVDGK VTGPDGNLIT PPYTSIPIAP NDFEYSLIGP
LRGNIGATVF FQNKGFLTGT IEYAGYSGMR ARTSYLTSAD NDAFKTDVKS EITDTFRNTV
NFRLGGEIRA NIFRARLGGA YITDPYLDQS DGIDRSKIVA SAGVGVRTDR FFVDLTGTFT
TYKSAYTPYY LNNPITYGSA EITNRPVNVM VTGGIFF