| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0217 |
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| Symbol | |
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| ID | 8223783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 243359 |
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| End bp | 244834 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928096 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003084653 |
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| Protein GI | 255034032 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000503447 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.017665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAG CCTTACCAAC ACGAAGTGAA AACTACTCCG AATGGTACAA TGAATTAGTG
AAACGCGCCG ATCTGGCCGA AAACTCGCCC GTCCGGGGTT GTATGGTGAT CAAGCCGTAC
GGTTATTCGA TCTGGGAAAA AATGCAGCGC GCGCTGGATG ACATGTTCAA GGAAACCGGC
CACACCAATG CCTATTTCCC GCTTTTCATC CCGAAATCGT ACCTGAGCAA GGAGGCTTCA
CACGTGGAAG GATTTGCCAA GGAATGCGCG GTTGTGACGC ATTATCGCCT CAAAAACGAT
CCCGATGGCA AAGGCGTGAT CGTGGACCCG GATGCGAAAC TGGAAGAAGA ACTGATCGTG
CGCCCGACGT CGGAAACGGT GATATGGAGC ACTTATAAAA ACTGGATTCA GTCGTACCGC
GACCTCCCCC TGCTCATTAA CCAGTGGGCC AACGTGGTGC GCTGGGAAAT GCGAACGCGC
CTGTTCCTGC GTACGGCCGA GTTCCTCTGG CAGGAAGGCC ACACCGCGCA CGCCACTGCA
CAGGAAGCGA TTGCCGAAAC CAAACAAATG CTGGAAGTAT ACGCGCAGTT CGCCGAAGAA
TGGATGGCCG TACCGGTTAT CAAAGGCGTG AAAACAGCGA ACGAACGGTT TGCCGGTGCC
GAAGATACCT ACTGCATCGA AGCCATGATG CAGGACGGAA AAGCATTGCA GGCGGGTACT
TCCCACTTCT TAGGTCAGAA CTTCGCGAAT GCGTTCGATG TGAAGTTCCA GGACAAAGAG
GGCAAGCTGG ACTACGTTTG GGGAACTTCA TGGGGCGTGA GCACCCGCCT GATGGGCGCG
CTCATTATGG CGCATTCCGA TGACGCAGGG CTTGTTTTAC CTCCCAAACT GGCGCCGATC
CAGGTGGTGA TCGTGCCGAT TTACCGCAAC GACGAACAGC TCGCGCAGAT CTCCGAAAAA
GTGGCGGAAA TCACGAAAGA CCTCAAAAAA CTGGGCATCA GCGTGAAATA CGACAGCAGC
GACAATGCGA AGCCGGGTTT CAAATTTGCG GAATATGAAC TGAAAGGTGT TCCCGTAAGA
TTGGCCATGG GCGGCCGCGA CCTCGAAAAC GGCACGGTGG AAGTAGCCCG CCGTGATACC
AAAACGAAGG AAACGGTTTC AGTGGCAGGC ATCGCCGCTT ATGTTCAAAA CCTGCTGAAC
GACATTCAGG AGTCCATTTA CAAAAAAGCG CTGACATTCC GCGAAGAGAA TACCTACAAG
GTCGATTCCT TTGAAGAATT TAACAATATC CTCGATACCA AAGGCGGCTT CGTCCTCGCC
CACTGGGACG GCACTTCCGA AACGGAAGAG AAAATCAAGG AGGAAACCAA AGCGACCATC
CGCTGCATTC CTTTGAACCA GGAAGCCGAA GAAGGCGTTT GCATCTACTC GGGCAAGCCG
TCCAAAGGAC GCGTGGTGTT CGCCCGGGCA TACTAA
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| Protein sequence | MSKALPTRSE NYSEWYNELV KRADLAENSP VRGCMVIKPY GYSIWEKMQR ALDDMFKETG
HTNAYFPLFI PKSYLSKEAS HVEGFAKECA VVTHYRLKND PDGKGVIVDP DAKLEEELIV
RPTSETVIWS TYKNWIQSYR DLPLLINQWA NVVRWEMRTR LFLRTAEFLW QEGHTAHATA
QEAIAETKQM LEVYAQFAEE WMAVPVIKGV KTANERFAGA EDTYCIEAMM QDGKALQAGT
SHFLGQNFAN AFDVKFQDKE GKLDYVWGTS WGVSTRLMGA LIMAHSDDAG LVLPPKLAPI
QVVIVPIYRN DEQLAQISEK VAEITKDLKK LGISVKYDSS DNAKPGFKFA EYELKGVPVR
LAMGGRDLEN GTVEVARRDT KTKETVSVAG IAAYVQNLLN DIQESIYKKA LTFREENTYK
VDSFEEFNNI LDTKGGFVLA HWDGTSETEE KIKEETKATI RCIPLNQEAE EGVCIYSGKP
SKGRVVFARA Y
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