Gene Dfer_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0216 
Symbol 
ID8223782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp242864 
End bp243292 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content52% 
IMG OID644928095 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003084652 
Protein GI255034031 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000508973 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0126237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG CAAAGGCTGG TGACAAAGTG CAGGTACATT ACAAAGGTAC CCTGCCGGAC 
GGACAACTTT TTGATTCCTC CGAGGGACGT GAGCCTTTGA GCTTCACGCT TGGAAGCGGA
CAGGTTATCA AAGGATTCGA CGATGGCGTG ACCGGCATGG AAGTGGGCGA TAAAAAGACC
ATTAACATTC CAAATGCCGA AGCTTACGGC CCTGTGAACG ACGAAATGGT GATCCGTTTC
GACCGTGCGC AAATCCCTGC CGATATTCCC CTGGAAATCG GCGGCACCCT GAACATGCAC
CAGGACGGCG GCCAGGTGAT CCCGGTAGTC GTAAGAGAAG TTACCGAAAC TTACGTGGTA
CTGGACGCAA ACCACCCATT GGCTGGCCAG GACCTGATTT TCGAACTCGA ATTGGTAGGT
ATCAACTAA
 
Protein sequence
MSQAKAGDKV QVHYKGTLPD GQLFDSSEGR EPLSFTLGSG QVIKGFDDGV TGMEVGDKKT 
INIPNAEAYG PVNDEMVIRF DRAQIPADIP LEIGGTLNMH QDGGQVIPVV VREVTETYVV
LDANHPLAGQ DLIFELELVG IN