| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0203 |
|---|
| Symbol | |
|---|
| ID | 8223769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 230093 |
|---|
| End bp | 231205 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644928082 |
|---|
| Product | alanine dehydrogenase |
|---|
| Protein accession | YP_003084639 |
|---|
| Protein GI | 255034018 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.193787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.15922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTG GCGTCCCCAA AGAAATCAAG AACAACGAGA ACCGGGTAGC TTTAACGCCC
GCAGGAGTCA CAGAGCTGCG TAAGCACGGA CACACAGTGT ACGTGCAGGC GGAAGCGGGC
AAAGGCAGCG GATTTACCGA CGAACAGTAT GCGCAAGCCG GAGCGAGCAT TCTCCCCACC
ATCGAAGAAG TTTACGGCAT TGCCGAAATG ATTATAAAGG TAAAAGAGCC CATTGCGAGT
GAATACCCAC TAATTAAAGA AAACCAGCTC CTGTTCACCT ACTTCCACTT CGCGTCCTCC
GAGCCCCTCA CCCACGCGAT GATCGAGCGC AAAGCAGTTT GCCTCGCCTA CGAAACCGTC
GAAAAAACAG ACAGAAGCCT TCCATTACTC GTTCCGATGA GCGAAGTAGC CGGCCGAATG
GCAATCCAGG AAGGTGCCAA ATACCTTGAA AAACCGATGG GCGGCTTTGG TATCCTGCTC
GGCGGCGTGG CAGGCGTGAA ACCGGCCAAT GTGCTGGTGC TCGGCGGCGG CATTGTAGGA
ACGCAATCGG CGAAGATGGC CGCAGGACTG GGAGCGAATG TAACGATTAT GGATATCAGC
CTGCCCCGGC TGCGCTACCT GGAAGACATT ATGCCCGCGA ATGTGGACAC GGTGATGTCC
AACGAATACA ATATCCGCGA GCTCATCCAG GGCGCCAACC TGATCATCGG CGGCGTATTG
ATTCCTGGCG CGAAAGCCCC GTCGCTTATT ACCCGCGACA TGCTCAAACT CATGAAGCCC
GGCACCGTGA TGGTGGACGT GGCGATCGAC CAGGGCGGCT GCTTCGAAAC ATCCAAAGCA
ACCACACACG AAGATCCGAT CTACGAAGTG GACGGCGTCG TACATTATTG CGTGGCCAAC
ATGCCGGGCG CGGTACCTTA CACCTCCACC CTCGCATTAA CCAACGCTAC CCTCCCCTAT
GCCCTGCAAC TGGCCAACCA GGGCTGGAAG CAGGCTTGCT CCACCAACGA GGAGCTGCGC
AGGGGATTGA ATGTCGTTCA CGGAAAAGTA GTATTTAAAG GTGTTGCCGA AGCATGGCAT
TTGCCTTATA CGGACGTCAA AGAATTATTC TGA
|
|---|
| Protein sequence | MTIGVPKEIK NNENRVALTP AGVTELRKHG HTVYVQAEAG KGSGFTDEQY AQAGASILPT
IEEVYGIAEM IIKVKEPIAS EYPLIKENQL LFTYFHFASS EPLTHAMIER KAVCLAYETV
EKTDRSLPLL VPMSEVAGRM AIQEGAKYLE KPMGGFGILL GGVAGVKPAN VLVLGGGIVG
TQSAKMAAGL GANVTIMDIS LPRLRYLEDI MPANVDTVMS NEYNIRELIQ GANLIIGGVL
IPGAKAPSLI TRDMLKLMKP GTVMVDVAID QGGCFETSKA TTHEDPIYEV DGVVHYCVAN
MPGAVPYTST LALTNATLPY ALQLANQGWK QACSTNEELR RGLNVVHGKV VFKGVAEAWH
LPYTDVKELF
|
|---|
| |