Gene Dfer_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0196 
Symbol 
ID8223762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp223355 
End bp224131 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID644928075 
ProductO-methyltransferase-like protein 
Protein accessionYP_003084632 
Protein GI255034011 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.130485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.259193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGCTG CTTATATTAA GTACCTTTTG CGCTCGGGAA ACGAGCATGC CATACACTCC 
CCTTTCCTGT TCGAACTTTA CAACCAAGTA ATTGCCGTCC GGAAGGACAA TAACCCGGAA
TACGAGGCGA TCCGAAAGCT GCGGAACGAA CTGCTGCGTT CCGACGAGCA AATCGAGATC
CTCGACCTCG GCGCCGGCTC GCGCATCAAC AAATCCAACC TGCGCAAGAT CAGGACCATC
GCAAAAAACG CAGAAAAACC CGCCAAATTC GGCCGACTTT TCTACCGGCT AATCCGGCGT
TTTCAACCGG CGACGATCAT CGAGCTCGGC ACATCACTCG GGCTCACTAC CTTATATATG
TCGAAAGCGA AGCCGGATGC GCAGCTGATC ACCTTCGAGG GCTGTCCGCA AACGGCCGGC
AAGGCGCAGG AGCATTTCGA ACGGGAGGGC GCGGAAAATG TCGAAGTCGT GCTGGGCAAT
ATTGATGAAA CGCTTCCCAA AAGGCTTGAA ACGCTCGACC GGCCCATTGA CTTTGCGTAT
TTCGACGCCA ACCACCGCTA CGAACCAACC GTACGGTATT TCGAACAGTG CCTGCCACAC
ATTCAAAACG GCTCGCTGTT CATTTTCGAC GATATTTATT GGTCGGAAGA AATGACCCGT
GCCTGGGAGT ACATCAAGGC GCATCCGCAA GTGACGGTGA CGGTGGACCT GTTCTGGATC
GGACTGGTTT TCTTCCGAAG CGAGCAGGTG AAGGAGGATT TCGTGCTGCG GTTCTGA
 
Protein sequence
MIAAYIKYLL RSGNEHAIHS PFLFELYNQV IAVRKDNNPE YEAIRKLRNE LLRSDEQIEI 
LDLGAGSRIN KSNLRKIRTI AKNAEKPAKF GRLFYRLIRR FQPATIIELG TSLGLTTLYM
SKAKPDAQLI TFEGCPQTAG KAQEHFEREG AENVEVVLGN IDETLPKRLE TLDRPIDFAY
FDANHRYEPT VRYFEQCLPH IQNGSLFIFD DIYWSEEMTR AWEYIKAHPQ VTVTVDLFWI
GLVFFRSEQV KEDFVLRF