Gene Dfer_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0192 
Symbol 
ID8223758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp218053 
End bp220095 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content56% 
IMG OID644928071 
Producthypothetical protein 
Protein accessionYP_003084628 
Protein GI255034007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0160216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.9714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAAA TCCTCTATCA AGGCAGGCTA TTCGACGAGA AAGCCGCCAA AACCCTGCTG 
TGGTCATTCG GACTAACGCT TCTGACGGTT ACTTACACCA CCGCGCAACG CTTCGACCAG
GTACTGTTCG GAAAACTGCC GCAAGACTAC CAGCTCTATC CGCGCGATGC CAACAGCGAG
GGCCATGCGC CCGTTTCCGG GATTGTGGAT GCCCCCGGGT GGAAATATGT ATCGGTGCAA
GTGCTGCGGA ACGGCGAGGC ATATCAGTAC AGGAGGGCAA ACATTCAGTA TGGAGGGAAT
GAAAAGGGTA CATTCAGCAC CGAGGCGACA ATCAAGGCGG AGCGGGCCAA CTATGATTTC
AAAGTTTTTC TTTGCAAAGA CGGCGACTCT TCGCTGATCG TCTCACGGAC GCGCGTAGTG
GCCGGTGACG TGTACATCCT TTCCGGCCAA TCCAATTCGA CGGGCTTTTT CGCGGAACGG
GACACGAGTA TGTTCTGCCG GACATTCGGA AGGATTACCG ATAACCTCAA CACGACGCCC
TACAATGCCG CCGACACGCT TTGGGCATTG TCGAATATGC ATCCGTACAA CAACGGCGTC
GGCTCGATCG GCTTTGAAAT CCAGAAACAA TTGATGGAAA AGTCGGGTGT GCCGAACTGC
CTCATCAATG CGGGATACCA CTGGTCGTCG GCCTATTCGC ATTCGCTGCG CACGGAAAAC
AATCCCACGG ATTTCACGAC CGGCTACGGC CGGATGCTTT ACCGGGCACA GAAAGCGGGC
GTCGCACATG CGGTGAAGGC CTACATTTTC AGACAAGGCG AAAGCGAATC GTACGGCGAG
GGCGGCAATT GGGAAGGACA TTTCGATGTT TTGTACAAAA ACCTGAAAAC CGATTTTGCC
GGGCTCGAAA AGCTCTATGT TTACCAGATC GACATCATTT ACCATTCTTC GCTGATAGGC
GTGCTCATCC GCGACTACCA GCGGCGCCTG CCCGATATTT ATCCCGACAT CGACAACCTC
GCAACCGTCG GAACCACCGG TTTCGACGGC CTGCATTACA ATCGCGATGG CAACAAGCAG
AGCGCATTTG AGCTTTCCCG CCTCATGCTC CGTGATTTTT ACGGTTCCAA GGACACCACC
GACATCGCCT CGCCGAACCT GAGAAAGGCA TTTTACAACA ATGCCGAAAA GAACAGCCTC
ACCCTGGTAT TCGACGAGGG CCAGCAATTG AAATACCCCG AACCCTACAA CCACCCCAGC
GGCCCCGTGC TCGACCTGAG CACATTTTTC TACCTCGATC ACCAGGCAGG CGCCGCAGCA
AGCGGCAAAG CGGAGGGCAA CCGCATTATC CTCGACCTTA AATCCCCGCA AAACGCATCC
AAGCTCGATT ACCTGCCCCC TTACCTCGAA CAGGGAGGCC CGTACTATCC TTTCACCGGT
CCGTACATTA CCAACTCCAA GGGTATGCGG GCATTTACGT TTTTCGGCGT ATCCATTGCC
ACGGCGCTGC CGGGCACGGT ACTCACTGCC CAAAGCGGGG CAGACGGAAA CGTGCGGCTT
ACCTGGCAGC CGGTTGCCGG AGCTAAGCAT TATGTGCTGG AACGCAAGTT TGGCGAGGAT
GCGGCTTTCG CGCCGCTTGC CCGCGTAGAA GGAACCGTGG CCGAATGGCG TGACGAACCG
GGCGAATCGG CCCTACCGAT TATTTATCGG CTGGTAGCGG TGAACGACGT GGCGGAATCC
GCCGCGCCTG CCATTGCGGA AGTTGCCCCT ACCCTCGTGC TGGGTACGGA AAAAGACCCG
GATGCGCGCT TCGACATATT TCCAAACCCG GCTGTGCGCG GCGAACAGGT TACCGTGCAA
TTCGCCCGGC AGCAAACCGG CCAGATCAGC CTGATCGGCC TCGATGGCCA ATCTTTGGTA
CACCGGAAAC TGAATGCCCG CCCCAATGGG ACATTCACCA TTCCGAAGCA AATTTCCGGG
ATGCATTTGA TCAAGTTTGA ATCGAATGGC AGGGTGTTCA GTAAAAAACT ATGGATCAGA
TAG
 
Protein sequence
MLKILYQGRL FDEKAAKTLL WSFGLTLLTV TYTTAQRFDQ VLFGKLPQDY QLYPRDANSE 
GHAPVSGIVD APGWKYVSVQ VLRNGEAYQY RRANIQYGGN EKGTFSTEAT IKAERANYDF
KVFLCKDGDS SLIVSRTRVV AGDVYILSGQ SNSTGFFAER DTSMFCRTFG RITDNLNTTP
YNAADTLWAL SNMHPYNNGV GSIGFEIQKQ LMEKSGVPNC LINAGYHWSS AYSHSLRTEN
NPTDFTTGYG RMLYRAQKAG VAHAVKAYIF RQGESESYGE GGNWEGHFDV LYKNLKTDFA
GLEKLYVYQI DIIYHSSLIG VLIRDYQRRL PDIYPDIDNL ATVGTTGFDG LHYNRDGNKQ
SAFELSRLML RDFYGSKDTT DIASPNLRKA FYNNAEKNSL TLVFDEGQQL KYPEPYNHPS
GPVLDLSTFF YLDHQAGAAA SGKAEGNRII LDLKSPQNAS KLDYLPPYLE QGGPYYPFTG
PYITNSKGMR AFTFFGVSIA TALPGTVLTA QSGADGNVRL TWQPVAGAKH YVLERKFGED
AAFAPLARVE GTVAEWRDEP GESALPIIYR LVAVNDVAES AAPAIAEVAP TLVLGTEKDP
DARFDIFPNP AVRGEQVTVQ FARQQTGQIS LIGLDGQSLV HRKLNARPNG TFTIPKQISG
MHLIKFESNG RVFSKKLWIR