Gene Dfer_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0179 
Symbol 
ID8223745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp206697 
End bp207911 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content52% 
IMG OID644928058 
Productglycosyl transferase group 1 
Protein accessionYP_003084615 
Protein GI255033994 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.160562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AAGGACATCA GATCATCATT TTTGGTTTAC CGCGATTTGA CGCACCTATC 
GAGTCCACCA ATTACACGAC CGCCAAGCTG CTCGCACGGG AAAACGAGGT GTATTACGTT
GAAAACCCCT TCACGCTGAG GGATTTTTTC AGGCTTCGGC GCACGCCGGA ATATCAGCTG
CGCAAGGAGC ATTTTTCGCT CACAGGCCAT TCACTGATCG AAACCGACAC GCCGAACCTC
AAAGTGATCA TTCCGCCGAT ATTGTTGTCG GTGAACTTCC TTCCGGAAAA CAGGCTGTTC
CGTGCGGCGC TGAAATTCAA TGAATTCCTC ATCCGCGCCA AGCTGAAAAG CATTCTCGAA
ACCTACCGGA TCAGGGATTA CATTTTCATC AATTCCTTCA ACTTCCATTA CCCCACGCTC
TCGGAAGGCC TCTCGCCGAG GCTCAAAGTG TACCATTGCC TCGATCCGAT GGTGCTGCCT
TTCAACCGGC GGCACGGTGT GGTTTCGGAG GATATCCTCG TGAAGCAGAG CGACGTGGTG
ATTTGCAGCA GCAGGCAATT GTACGAGGAG AAAAAACAGC AGAACCCGTA CAGCTATTTC
GTGGCCAATG CGGCCGATCT GGGCCATAGC AGCAAGGCTT TGAACCCCGA TTTGCCGGTT
TACCCGGCCA TTGCCGCATT AAAAAAGCCG GTAATCGGTT ACCTGGGTGC GATCGAGCGG
CGCATGGATT ATGATTTGCT GAAAACGGTC ATACTCGCGA ATCCCGATAA GAGCTTTGCA
TTCGTGGGGC CGGTGTCGCG GGAGTTTGTG CCCGACTGGT TCTTTACCGC CGAAAATGTC
CATTTCCCCG GCCCGATCGA TTACGACGAT ATGCCTGCGG TGATCAAAGG CTTCGATGTC
GCGCTGATCC CGTTCAAGAA AGACGACGTA AGCAGCAGCA TTTTTCCATT GAAACTCTTC
GAATACCTCG GCGCGGGCAA ACCCGTGGTC GCAATTGACT TTAACCCTGA TTTAAAGGAG
TTTACCAAAG GCGAGGTGAC ATTCTGCGAA ACTGCGGACA GTTTTTCGGA AGCCATTAAC
ACGGCTCTTC AAACCGATAA TGCCGAGCAG CGCAAAAACC GCGTAACGAT CGCCGCCGAA
AACACGTGGG AAAACCGTGT GGATGCCATT GGCGACATTA TCCATTACCA CCTCGAACAG
GTGATCCAGC CGTAG
 
Protein sequence
MKLKGHQIII FGLPRFDAPI ESTNYTTAKL LARENEVYYV ENPFTLRDFF RLRRTPEYQL 
RKEHFSLTGH SLIETDTPNL KVIIPPILLS VNFLPENRLF RAALKFNEFL IRAKLKSILE
TYRIRDYIFI NSFNFHYPTL SEGLSPRLKV YHCLDPMVLP FNRRHGVVSE DILVKQSDVV
ICSSRQLYEE KKQQNPYSYF VANAADLGHS SKALNPDLPV YPAIAALKKP VIGYLGAIER
RMDYDLLKTV ILANPDKSFA FVGPVSREFV PDWFFTAENV HFPGPIDYDD MPAVIKGFDV
ALIPFKKDDV SSSIFPLKLF EYLGAGKPVV AIDFNPDLKE FTKGEVTFCE TADSFSEAIN
TALQTDNAEQ RKNRVTIAAE NTWENRVDAI GDIIHYHLEQ VIQP