| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0177 |
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| Symbol | |
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| ID | 8223743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 204448 |
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| End bp | 205788 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644928056 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003084613 |
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| Protein GI | 255033992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.89066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGGAA AAAAGGATTA CTGGCTCAAA TCGGGGTTTA TCAATATCGT CCAGAACTTC
TCGGGCGTAT TCTTCGGCTT CGCGGGCTTC TATTTGCTGG TGCGGCTGTT GACAAAGCAC
GATTTTGGGG TGTGGACGCT CTTCATCTCC ACGACCACCA TCCTGGAAGC GATCCGCAGC
GGCCTCTTGC AGAATGCATT GATCAAATAC ATTTCATCAT CCGACGCCCG CGAACATCCG
GCCATTATTA CCGCCTCGTT TGCGATCAAC GGCATCGTGC AGGTCGTTTG CATTGCCGCG
ATCCTCGTTT TCTCACCCTG GCTGAGCCGG CTCTGGGATG CGCCCCAGCT CGTGGAAATG
ATGTATTGGT ACATCGCCAT TTATCTGCTT TCGGGCTTGC AGGCGCAGTT TAACGGCATC
GAACAGGCCA ATTTGCGGTT CAACGGCATT TTCGTCACCA CCCTGATCCG CCAGGGCGTT
TTCTTTACGT TTGTGCTGGT TTGCTACTTT TTCAGCTTAT CGGTTGAACT GATTTTCCTC
GTGTGGGTGC AGATCGCGAG CGCGCTTGCG GGCATGCTCA TCGCGTACAG CCATGCGCGC
GGGCATCTTG CATTATCTGC CAAAATAAGT CGCGAATGGA TGGCCAAGCT GTTTGGGTAC
GGCAAATATG CTTTTGGCAC ATTAATCAGC TCCCTGCTTT CCGGCACCAT CGACCAGATG
ATGCTCGGCG CGATGCTCTC ACCGGCGGCT TCGGGCGCAT TCAATATCGC CGTGCGGATC
ACCAACCTGA TCGACATTCC GGGTAACGCG GTGGCTACGA TCGTGTTTCC GCAGAGCGCA
AAGCGCATGG AGTCGGAAGG GCCGGCGGCC ATTAAGTATT TGTACGAAAA ATCGGTGGGT
ACGACGCTCG CCCTGGTTGT GCCGGTAGTA ATTTTTCTGT ACCTGTTTTC CGGCATTGTG
ATCACGCTCA TTGCGGGAGA AAAATATGCG GATTCCATTC CATTACTTCA AATCACGCTG
CTTTACTGCC TGTTGATCCC TTTTGGAAGG CAGTTCGGCA CCATTCTGGA TTCCATCGGA
AAAACGCGGA TGACGTTTTT TGTCGTCATA GGTACGGCTA CGTTGAACCT CTGCCTGAAT
TATTTTTTCA TCCGGGAATG GGGCGTCGTA GGTGCGGCTT ACGCAACTTT ATGTTCCAAT
ATCGTAGGTT TTGCAGTGGC GCAGGTGATT CTGCGGAGGG AAATCGGCGT GAGTGTTTTG
AATACGTTCG TGTATATGTA CAAATTCTAT CCCGAGTTCC TTGACCGTTA TTTGCGGCCT
ATGTTGAAAG CGCGGTCTTA A
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| Protein sequence | MEGKKDYWLK SGFINIVQNF SGVFFGFAGF YLLVRLLTKH DFGVWTLFIS TTTILEAIRS
GLLQNALIKY ISSSDAREHP AIITASFAIN GIVQVVCIAA ILVFSPWLSR LWDAPQLVEM
MYWYIAIYLL SGLQAQFNGI EQANLRFNGI FVTTLIRQGV FFTFVLVCYF FSLSVELIFL
VWVQIASALA GMLIAYSHAR GHLALSAKIS REWMAKLFGY GKYAFGTLIS SLLSGTIDQM
MLGAMLSPAA SGAFNIAVRI TNLIDIPGNA VATIVFPQSA KRMESEGPAA IKYLYEKSVG
TTLALVVPVV IFLYLFSGIV ITLIAGEKYA DSIPLLQITL LYCLLIPFGR QFGTILDSIG
KTRMTFFVVI GTATLNLCLN YFFIREWGVV GAAYATLCSN IVGFAVAQVI LRREIGVSVL
NTFVYMYKFY PEFLDRYLRP MLKARS
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