Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0171 |
Symbol | |
ID | 8223737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 196831 |
End bp | 199437 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644928050 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_003084607 |
Protein GI | 255033986 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.766824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCC GCCTGACAAC TGACTCATTC AGATGGTATT ATGCCAGTAT TTACCTGGGA TTGGCATTGA TTTTCGGCTC CCAGTATTTC ACCTACAAGA ACGTCCGCGA CCTTTCGCTC AACAACGAGC GCCTCAATGT GACGATCGGC GTGCTGAACC AGACGGCTAA TTTCGGGCTT GTCACCAAAG ATTTTCAGTC GAATATGCGC GGTTATCTGA TCACGCAGGA TAATGAACTG CTTTCGGATA ACTACAACAA GAAGATCCAG CTCGTGAGCA TTACCGACAC GCTGTTCAAC CTTGTTAAAA CTGACGAAAC GCAGACGCGG CGCGTGAAGG AACTACTGAG CATTTCGAGC CAGATCGTCG CCTACACGCA GAATGTCGTC AGCATTTACC GGACCCAGGG CAGCGAGCCT GCATTTGCGA AAATCCAGGA AGGCGAAGGG ATCAGGCTCA ACCAGCTGCT CACGGCCAAG ATCGACCAGA TCGAAGATTA CGAAAACCAC AACCTGGACC AGCGCCGGAA GCTCGTTTCG GACACGCAGC AGAATTCCAT CCTGTTTATC CTGCTCACCG GGGCGGTCGG CTTCATCCTC ACCATCCTCT CGATCATCTT CCTGAACCTC GACAAGCGCA AGCAGCGGCT GCTTCAAAAT GAAATCAAGG AAAGGGAACG GACGGTGAGC CAGTACCTGG AAGCCATTCC CGACGGTGTG ATGGTGATCA ATAGCGAACG GAAAATTGAA CTGATCAACG AATCGGGGCG GGAAATCCTG GGCGTGGACG GCGAGCGGCC CGCGACGCTC GAAGAGCAGG TGACGCGCAT CAAACTCCTC GATCCGACAC GGTACCACGT CCGCTTCTCG GCCGACACCC TACCCGTTGC GCGGGCATTG CAAGGCGAAA AACTCACCGG CAACAAGATC GACCTGGTGA AAAACGATAA GATTTATCAC CTCGAAACCA GCGTGCAGCC GGTGATCGGG CTCGACGGCC GGATCAAGAG CGCGATTACC GTTTTCAGGG ACATTACCGA GCGGGCCAAC TACGAGGCGA CGCTGGAAAA AGCACGGAGC CTGGCCGAGA AATCCGTGCG GGTGAAGGAC ATTTTCCTTT CCAATGTGAG CCACGAGATC CGGACGCCGC TCAATGCGAT CATCGGGTTC ACCAACCTGC TTATGGGAGA AGTGACCGAC CAGAAAAGCC AGGAATATGT CGGTTACATT CAGTACGCGG GCAAAAACCT GCTCGAACTG ATCAACGACA TTCTCGACTT TTCCAAAATC GAAGCCGGGC AGGTCCATCT CGAAAAAGCG CCCGTATCCA TCCGCGAGCT GGCCGACGAG ATTTCGGCGA TCATGCACCA CCGCGCCGTC GAAAAAGGCA TTGTTTACGA AGCGCTGCTG GCCGACGGAT TGCCCGAATT TATCGAAACA GACAAATTGC GGCTAACGCA GATATTGCTC AATGTGTGCG GCAATGCGGT GAAATTCACG GAGAAAGGCA GCGTAAAACT CCGCGTAGCA CCGATCGGCG AGCCGCTGAA CGACGTCCAG AACATCCGTT TCGAGGTGAA AGACACGGGT GTGGGTATTC CAAAAGACAA ACTCAAAGAG GTGTTTAACC GCTTCGTGCA GGCCACTGAA AGCACTACGC GGGTATTCGG CGGCACGGGC CTTGGACTGA GCATCGTAAA ATCGCTTGTT CAGCTATTCG AAGGCACATT GAACCTCGAA AGCGAGCTGG GGCAGGGAAC CGTGTTTACC ATGGACTTCC CTTTCAGGAT CGTGAACGAC GCCGGGCTGC ATGACGACAT TGAGAAAGAA ATTGACATTA CCGCATCTGT AACCTCACTG CGCATTCTCG CGGCAGAAGA CAATACATTG AACCAGAAGC TGCTGAAAGC GATTTTCGAA CGGCTGAATA TCCCGCTGAC GATCGTGAAC AACGGCCAGG AAGCGCTCGA CCGGCTTCGG GAGGAAACAT TCGACCTCGT TTTGATGGAC ATTCAAATGC CCGTCATGGA CGGCTACACG GCCATCAAGG AAATCCGCCG CACGGTTTCG AGCACCATTC CGATCATCAC CATGACCGCC CACGCGATGG TCGGAGAGAA AGAAGAATGC CTGAGTATCG GCGCCAACAG CTATATTTCG AAACCTTTTA AGGAAAGTGA ACTTTTATAT ACCATTGCAC ATCTTGGAAA CAAAGAGAAT TACGAAGCAC AACCCAAAGA ATTTACTCAA CAACCCTCCC CTGCTAAAAT GACAGACACG ATCCTGAATC TCGACTACCT CACCGAAATT ACCGGCGGCG ACCAGGAATT GCGCGACGAG CTGATCGCCC TTTTCGAAAA AGACAGCAAA ATTCAACTGA TGAACATTGC CGACGCGTCA CTGGCCAACG ACCTCGAAAA GCTGCGCCAG GCCATTCACA AATTCCGATC TTCACTGTTT TCCGTGGGAT TGCTCAATAC CGCCAATCAA TACAAGGAGC TGGAAGCTAC CCTGAAACAA GGCAACTGGA ACAGCGGCCT TAACCAGAAG CTGGTGGAAT TGAAAGCTGA ATCGGAAACG GGATTATCGC AGCTGAAAAA CCTGTAA
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Protein sequence | MPTRLTTDSF RWYYASIYLG LALIFGSQYF TYKNVRDLSL NNERLNVTIG VLNQTANFGL VTKDFQSNMR GYLITQDNEL LSDNYNKKIQ LVSITDTLFN LVKTDETQTR RVKELLSISS QIVAYTQNVV SIYRTQGSEP AFAKIQEGEG IRLNQLLTAK IDQIEDYENH NLDQRRKLVS DTQQNSILFI LLTGAVGFIL TILSIIFLNL DKRKQRLLQN EIKERERTVS QYLEAIPDGV MVINSERKIE LINESGREIL GVDGERPATL EEQVTRIKLL DPTRYHVRFS ADTLPVARAL QGEKLTGNKI DLVKNDKIYH LETSVQPVIG LDGRIKSAIT VFRDITERAN YEATLEKARS LAEKSVRVKD IFLSNVSHEI RTPLNAIIGF TNLLMGEVTD QKSQEYVGYI QYAGKNLLEL INDILDFSKI EAGQVHLEKA PVSIRELADE ISAIMHHRAV EKGIVYEALL ADGLPEFIET DKLRLTQILL NVCGNAVKFT EKGSVKLRVA PIGEPLNDVQ NIRFEVKDTG VGIPKDKLKE VFNRFVQATE STTRVFGGTG LGLSIVKSLV QLFEGTLNLE SELGQGTVFT MDFPFRIVND AGLHDDIEKE IDITASVTSL RILAAEDNTL NQKLLKAIFE RLNIPLTIVN NGQEALDRLR EETFDLVLMD IQMPVMDGYT AIKEIRRTVS STIPIITMTA HAMVGEKEEC LSIGANSYIS KPFKESELLY TIAHLGNKEN YEAQPKEFTQ QPSPAKMTDT ILNLDYLTEI TGGDQELRDE LIALFEKDSK IQLMNIADAS LANDLEKLRQ AIHKFRSSLF SVGLLNTANQ YKELEATLKQ GNWNSGLNQK LVELKAESET GLSQLKNL
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